Sb04g003140 (Sorghum bicolor)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Sb04g003140 T279204_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PHR1
M02329_2.00 		Oryza sativa
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7755 		0.758 0.851
PHL6
M02295_2.00 		Arabidopsis thaliana
NNWKATNCBN
NVGNATMWNN		 PBM
Weirauch et al.(2014)
pTH7071 		0.724 0.787
PHL6
M07083_2.00 		Arabidopsis thaliana
NDGAAAACH
DGTTTTCHN		 Dap-seq
OMalley et al.(2016)
At3g13040_col_b 		0.724 0.787
PHR1
M02302_2.00 		Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7249 		0.680 0.809
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb04g003140.1 Myb 239 290

Links

Other Myb/SANT family TFs
Other Sorghum bicolor TFs

220 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G010920 Zea mays GRMZM2G010920 I 0.849
Pavir.Db00228 Panicum virgatum Pavir.Db00228 I 0.808
Pavir.Aa03223 Panicum virgatum Pavir.Aa03223 I 0.808
Traes_7AL_D45376F32 Triticum aestivum Traes_7AL_D45376F32 I 0.808
F775_29452 Aegilops tauschii F775_29452 I 0.808
Pavir.J14911 Panicum virgatum Pavir.J14911 I 0.808
Traes_7DL_090D0E08E Triticum aestivum Traes_7DL_090D0E08E I 0.808
Traes_7BL_09DD5A1DC Triticum aestivum Traes_7BL_09DD5A1DC I 0.808
TRIUR3_32904 Triticum urartu TRIUR3_32904 I 0.808
Si017191m.g Setaria italica Si017191m.g I 0.808
MLOC_54829 Hordeum vulgare MLOC_54829 I 0.808
OB06G34350 Oryza brachyantha OB06G34350 I 0.808
ORGLA06G0222600 Oryza glaberrima ORGLA06G0222600 I 0.808
OS06G0703900 Oryza sativa OS06G0703900 I 0.808
BGIOSGA023563 Oryza indica BGIOSGA023563 I 0.808
Si006354m.g Setaria italica Si006354m.g I 0.808
BRADI1G34470 Brachypodium distachyon BRADI1G34470 I 0.808
Sb10g029200 Sorghum bicolor Sb10g029200 I 0.802
Traes_4DL_2C27C34AF Triticum aestivum Traes_4DL_2C27C34AF I 0.801
Traes_4AS_7220D33B3 Triticum aestivum Traes_4AS_7220D33B3 I 0.801
MLOC_5585 Hordeum vulgare MLOC_5585 I 0.801
F775_09615 Aegilops tauschii F775_09615 I 0.801
Pavir.J27649 Panicum virgatum Pavir.J27649 I 0.790
BRADI3G03538 Brachypodium distachyon BRADI3G03538 I 0.786
Bostr.3640s0078 Boechera stricta Bostr.3640s0078 I 0.777
Cagra.5641s0065 Capsella grandiflora Cagra.5641s0065 I 0.777
Carubv10013698m.g Capsella rubella Carubv10013698m.g I 0.777
Bo1g138650 Brassica oleracea Bo1g138650 I 0.771
Bra001484 Brassica rapa Bra001484 I 0.771
Bo3g065290 Brassica oleracea Bo3g065290 I 0.771
Bra039364 Brassica rapa Bra039364 I 0.771
Thhalv10020738m.g Eutrema salsugineum Thhalv10020738m.g I 0.760
PHR1 Oryza sativa OS03G0329900 D 0.758
OB03G25800 Oryza brachyantha OB03G25800 I 0.758
Eucgr.A01323 Eucalyptus grandis Eucgr.A01323 I 0.758
LPERR03G14050 Leersia perrieri LPERR03G14050 I 0.758
evm.TU.supercontig_87.3 Carica papaya evm.TU.supercontig_87.3 I 0.758
ORGLA03G0154000 Oryza glaberrima ORGLA03G0154000 I 0.758
OPUNC03G15590 Oryza punctata OPUNC03G15590 I 0.758
Aquca_017_00793 Aquilegia coerulea Aquca_017_00793 I 0.758
OLONG_005622 Oryza longistaminata OLONG_005622 I 0.758
ONIVA03G17050 Oryza nivara ONIVA03G17050 I 0.758
Solyc06g008200.2 Solanum lycopersicum Solyc06g008200.2 I 0.758
BRADI3G55120 Brachypodium distachyon BRADI3G55120 I 0.758
OMERI03G14370 Oryza meridionalis OMERI03G14370 I 0.758
PHR1 Oryza indica BGIOSGA012553 I 0.758
ONIVA02G03010 Oryza nivara ONIVA02G03010 I 0.753
OMERI02G03860 Oryza meridionalis OMERI02G03860 I 0.753
ORGLA02G0030200 Oryza glaberrima ORGLA02G0030200 I 0.753
OPUNC02G02530 Oryza punctata OPUNC02G02530 I 0.753
PDK_20s1523411g004 Phoenix dactylifera PDK_20s1523411g004 I 0.753
OB02G12880 Oryza brachyantha OB02G12880 I 0.753
OGLUM02G03100 Oryza glumaepatula OGLUM02G03100 I 0.753
OBART02G03200 Oryza barthii OBART02G03200 I 0.753
ORUFI02G03130 Oryza rufipogon ORUFI02G03130 I 0.753
PHR3 Oryza indica BGIOSGA007162 I 0.753
GSMUA_Achr10G23260_001 Musa acuminata GSMUA_Achr10G23260_001 I 0.753
PHR3 Oryza sativa OS02G0139000 I 0.753
fgenesh2_kg.3__1373__AT3G13040.1 Arabidopsis lyrata fgenesh2_kg.3__1373__AT3G13040.1 I 0.749
BRADI1G63530 Brachypodium distachyon BRADI1G63530 I 0.747
GSMUA_Achr7G15740_001 Musa acuminata GSMUA_Achr7G15740_001 I 0.745
Solyc09g072830.2 Solanum lycopersicum Solyc09g072830.2 I 0.740
mgf005047m Mimulus guttatus mgf005047m I 0.740
PK01823.1 Cannabis sativa PK01823.1 I 0.740
LPERR02G03030 Leersia perrieri LPERR02G03030 I 0.735
TCM_027630 Theobroma cacao TCM_027630 I 0.734
TCM_039819 Theobroma cacao TCM_039819 I 0.734
orange1.1g011006m.g Citrus sinensis orange1.1g011006m.g I 0.734
Gorai.011G001500 Gossypium raimondii Gorai.011G001500 I 0.734
evm.TU.supercontig_10.14 Carica papaya evm.TU.supercontig_10.14 I 0.734
Gorai.009G120900 Gossypium raimondii Gorai.009G120900 I 0.734
Ciclev10030185m.g Citrus clementina Ciclev10030185m.g I 0.734
TRIUR3_02291 Triticum urartu TRIUR3_02291 I 0.730
Traes_6BL_5D8EE6802 Triticum aestivum Traes_6BL_5D8EE6802 I 0.730
ORUFI02G38560 Oryza rufipogon ORUFI02G38560 I 0.730
OB02G43730 Oryza brachyantha OB02G43730 I 0.730
BGIOSGA005373 Oryza indica BGIOSGA005373 I 0.730
OLONG_010553 Oryza longistaminata OLONG_010553 I 0.730
VIT_09s0070g00410 Vitis vinifera VIT_09s0070g00410 I 0.726
PHL6 Arabidopsis thaliana AT3G13040 D 0.724
Traes_6BS_00D311B94 Triticum aestivum Traes_6BS_00D311B94 I 0.720
Traes_6DS_20D189350 Triticum aestivum Traes_6DS_20D189350 I 0.720
F775_05042 Aegilops tauschii F775_05042 I 0.720
POPTR_0007s15110 Populus trichocarpa POPTR_0007s15110 I 0.719
cassava35980.valid.m1 Manihot esculenta cassava35980.valid.m1 I 0.719
cassava22661.valid.m1 Manihot esculenta cassava22661.valid.m1 I 0.719
29680.m001711 Ricinus communis 29680.m001711 I 0.719
SapurV1A.0703s0050 Salix purpurea SapurV1A.0703s0050 I 0.719
Cla003565 Citrullus lanatus Cla003565 I 0.719
Lus10035705.g Linum usitatissimum Lus10035705.g I 0.719
cassava35979.valid.m1 Manihot esculenta cassava35979.valid.m1 I 0.719
cassava44101.valid.m1 Manihot esculenta cassava44101.valid.m1 I 0.719
cassava39270.m1 Manihot esculenta cassava39270.m1 I 0.719
Cucsa.027530 Cucumis sativus Cucsa.027530 I 0.719
Gorai.004G023100 Gossypium raimondii Gorai.004G023100 I 0.715
Lus10037296.g Linum usitatissimum Lus10037296.g I 0.713
VIT_09s0054g01620 Vitis vinifera VIT_09s0054g01620 I 0.713
POPTR_0014s00280 Populus trichocarpa POPTR_0014s00280 I 0.713
MLOC_5837 Hordeum vulgare MLOC_5837 I 0.712
mgf020931m Mimulus guttatus mgf020931m I 0.709
Traes_6AS_DBE4E3146 Triticum aestivum Traes_6AS_DBE4E3146 I 0.704
Cucsa.037070 Cucumis sativus Cucsa.037070 I 0.701
Eucgr.F04055 Eucalyptus grandis Eucgr.F04055 I 0.701
Pm013132 Prunus mume Pm013132 I 0.701
gene05518-v1.0-hybrid Fragaria vesca gene05518-v1.0-hybrid I 0.701
PRUPE_ppa005159mg Prunus persica PRUPE_ppa005159mg I 0.701
Cla006047 Citrullus lanatus Cla006047 I 0.701
mgf011847m Mimulus guttatus mgf011847m I 0.700
Pavir.Ia03429 Panicum virgatum Pavir.Ia03429 I 0.698
Pavir.J39104 Panicum virgatum Pavir.J39104 I 0.698
chr1.CM0295.930.nd Lotus japonicus chr1.CM0295.930.nd I 0.698
PK01035.1 Cannabis sativa PK01035.1 I 0.698
SapurV1A.0252s0390 Salix purpurea SapurV1A.0252s0390 I 0.698
29637.m000753 Ricinus communis 29637.m000753 I 0.698
Lus10022886.g Linum usitatissimum Lus10022886.g I 0.698
Lus10022885.g Linum usitatissimum Lus10022885.g I 0.698
Gorai.007G149100 Gossypium raimondii Gorai.007G149100 I 0.698
Ciclev10019956m.g Citrus clementina Ciclev10019956m.g I 0.698
cassava37547.valid.m1 Manihot esculenta cassava37547.valid.m1 I 0.698
Lus10024938.g Linum usitatissimum Lus10024938.g I 0.698
MDP0000321461 Malus domestica MDP0000321461 I 0.698
MDP0000285150 Malus domestica MDP0000285150 I 0.698
VIT_07s0005g04120 Vitis vinifera VIT_07s0005g04120 I 0.698
Ca_12255 Cicer arietinum Ca_12255 I 0.698
orange1.1g011805m.g Citrus sinensis orange1.1g011805m.g I 0.698
Si035682m.g Setaria italica Si035682m.g I 0.698
GSMUA_Achr5G12960_001 Musa acuminata GSMUA_Achr5G12960_001 I 0.698
MLOC_52271 Hordeum vulgare MLOC_52271 I 0.698
BRADI5G25320 Brachypodium distachyon BRADI5G25320 I 0.698
GRMZM2G006477 Zea mays GRMZM2G006477 I 0.698
MTR_7g098250 Medicago truncatula MTR_7g098250 I 0.698
GLYMA03G32350 Glycine max GLYMA03G32350 I 0.698
GLYMA19G35080 Glycine max GLYMA19G35080 I 0.698
GRMZM2G124495 Zea mays GRMZM2G124495 I 0.698
GLYMA13G18805 Glycine max GLYMA13G18805 I 0.698
GLYMA10G04540 Glycine max GLYMA10G04540 I 0.698
Bo9g010090 Brassica oleracea Bo9g010090 I 0.698
Bra036123 Brassica rapa Bra036123 I 0.698
TCM_003939 Theobroma cacao TCM_003939 I 0.698
TCM_026171 Theobroma cacao TCM_026171 I 0.698
AMTR_s00142p00049490 Amborella trichopoda AMTR_s00142p00049490 I 0.698
LPERR02G30520 Leersia perrieri LPERR02G30520 I 0.698
GSMUA_Achr8G12580_001 Musa acuminata GSMUA_Achr8G12580_001 I 0.698
Sb01g036440 Sorghum bicolor Sb01g036440 I 0.698
30169.m006598 Ricinus communis 30169.m006598 I 0.697
PGSC0003DMG400023467 Solanum tuberosum PGSC0003DMG400023467 I 0.697
Solyc05g055940.2 Solanum lycopersicum Solyc05g055940.2 I 0.697
Bra014348 Brassica rapa Bra014348 I 0.691
Lus10039124.g Linum usitatissimum Lus10039124.g I 0.691
Lus10038734.g Linum usitatissimum Lus10038734.g I 0.691
MDP0000132340 Malus domestica MDP0000132340 I 0.690
GLYMA19G43690 Glycine max GLYMA19G43690 I 0.690
MTR_1g080330 Medicago truncatula MTR_1g080330 I 0.690
PRUPE_ppa005708mg Prunus persica PRUPE_ppa005708mg I 0.690
fgenesh1_pg.scaffold_143000021 Physcomitrella patens fgenesh1_pg.scaffold_143000021 I 0.690
Pm003600 Prunus mume Pm003600 I 0.690
LjSGA_026114.1 Lotus japonicus LjSGA_026114.1 I 0.690
Solyc04g050070.1 Solanum lycopersicum Solyc04g050070.1 I 0.690
PK16227.1 Cannabis sativa PK16227.1 I 0.690
Ca_03781 Cicer arietinum Ca_03781 I 0.690
fgenesh1_pg.scaffold_391000034 Physcomitrella patens fgenesh1_pg.scaffold_391000034 I 0.690
TRAES3BF104900050CFD_g Triticum aestivum TRAES3BF104900050CFD_g I 0.687
GSMUA_Achr11G02560_001 Musa acuminata GSMUA_Achr11G02560_001 I 0.687
GRMZM2G162409 Zea mays GRMZM2G162409 I 0.687
Pavir.Bb01566 Panicum virgatum Pavir.Bb01566 I 0.687
PHR2 Oryza indica BGIOSGA025605 I 0.687
PDK_20s1306081g005 Phoenix dactylifera PDK_20s1306081g005 I 0.687
BRADI1G28920 Brachypodium distachyon BRADI1G28920 I 0.687
F775_09823 Aegilops tauschii F775_09823 I 0.687
Pavir.Ba02554 Panicum virgatum Pavir.Ba02554 I 0.687
MDP0000248927 Malus domestica MDP0000248927 I 0.687
gene08317-v1.0-hybrid Fragaria vesca gene08317-v1.0-hybrid I 0.687
OMERI07G09960 Oryza meridionalis OMERI07G09960 I 0.687
ONIVA07G10340 Oryza nivara ONIVA07G10340 I 0.687
OLONG_021629 Oryza longistaminata OLONG_021629 I 0.687
POPTR_0002s25960 Populus trichocarpa POPTR_0002s25960 I 0.687
OBART07G12530 Oryza barthii OBART07G12530 I 0.687
LPERR07G10540 Leersia perrieri LPERR07G10540 I 0.687
OPUNC07G11150 Oryza punctata OPUNC07G11150 I 0.687
PHR2 Oryza sativa OS07G0438800 I 0.687
ORUFI07G12650 Oryza rufipogon ORUFI07G12650 I 0.687
ORGLA07G0105500 Oryza glaberrima ORGLA07G0105500 I 0.687
PRUPE_ppa004886mg Prunus persica PRUPE_ppa004886mg I 0.687
OB07G18720 Oryza brachyantha OB07G18720 I 0.687
OGLUM07G11980 Oryza glumaepatula OGLUM07G11980 I 0.687
Si029945m.g Setaria italica Si029945m.g I 0.687
Sb02g010520 Sorghum bicolor Sb02g010520 I 0.687
Traes_3AS_6EEB8D2B2 Triticum aestivum Traes_3AS_6EEB8D2B2 I 0.687
MLOC_65279 Hordeum vulgare MLOC_65279 I 0.684
GRMZM2G035370 Zea mays GRMZM2G035370 I 0.681
PHR1 Arabidopsis thaliana AT4G28610 D 0.680
PHR1 Arabidopsis lyrata fgenesh2_kg.7__1335__AT4G28610.1 I 0.680
Cagra.1225s0029 Capsella grandiflora Cagra.1225s0029 I 0.680
scaffold_304362.1 Arabidopsis lyrata scaffold_304362.1 I 0.680
Bra010355 Brassica rapa Bra010355 I 0.680
Thhalv10025330m.g Eutrema salsugineum Thhalv10025330m.g I 0.680
Bo8g054450 Brassica oleracea Bo8g054450 I 0.680
Bostr.7867s0704 Boechera stricta Bostr.7867s0704 I 0.680
Bostr.7903s0128 Boechera stricta Bostr.7903s0128 I 0.680
Thhalv10002005m.g Eutrema salsugineum Thhalv10002005m.g I 0.680
MDP0000159434 Malus domestica MDP0000159434 I 0.680
PRUPE_ppa023008mg Prunus persica PRUPE_ppa023008mg I 0.678
MDP0000773970 Malus domestica MDP0000773970 I 0.678
MDP0000241055 Malus domestica MDP0000241055 I 0.678
gene18340-v1.0-hybrid Fragaria vesca gene18340-v1.0-hybrid I 0.678
POPTR_0018s14830 Populus trichocarpa POPTR_0018s14830 I 0.677
cassava31821.valid.m1 Manihot esculenta cassava31821.valid.m1 I 0.677
AMTR_s00022p00190540 Amborella trichopoda AMTR_s00022p00190540 I 0.675
GSMUA_Achr2G10180_001 Musa acuminata GSMUA_Achr2G10180_001 I 0.674
chr1.CM0600.200.nd Lotus japonicus chr1.CM0600.200.nd I 0.672
gene16679-v1.0-hybrid Fragaria vesca gene16679-v1.0-hybrid I 0.672
GLYMA03G41040 Glycine max GLYMA03G41040 I 0.672
Lus10028102.g Linum usitatissimum Lus10028102.g I 0.671
Lus10040583.g Linum usitatissimum Lus10040583.g I 0.671
cassava34206.m1 Manihot esculenta cassava34206.m1 I 0.671
Lus10040569.g Linum usitatissimum Lus10040569.g I 0.671
PDK_20s1462141g001 Phoenix dactylifera PDK_20s1462141g001 I 0.666
GSMUA_Achr4G30200_001 Musa acuminata GSMUA_Achr4G30200_001 I 0.666
MLOC_60198 Hordeum vulgare MLOC_60198 I 0.666
GLYMA18G43130 Glycine max GLYMA18G43130 I 0.664