PGSC0003DMG400011435 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG400011435 T277589_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400029756 Myb 227 278
PGSC0003DMT400029758 Myb 227 278

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

175 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc10g078720.1 Solanum lycopersicum Solyc10g078720.1 N 0.909
TCM_024886 Theobroma cacao TCM_024886 N 0.860
Gorai.002G225400 Gossypium raimondii Gorai.002G225400 N 0.860
VIT_08s0007g06310 Vitis vinifera VIT_08s0007g06310 I 0.857
Bo3g004040 Brassica oleracea Bo3g004040 N 0.854
Bra005912 Brassica rapa Bra005912 N 0.854
mgf007532m Mimulus guttatus mgf007532m N 0.854
mgf007985m Mimulus guttatus mgf007985m N 0.854
Bo2g007410 Brassica oleracea Bo2g007410 N 0.842
Bra028717 Brassica rapa Bra028717 N 0.842
fgenesh2_kg.6__627__AT5G06800.1 Arabidopsis lyrata fgenesh2_kg.6__627__AT5G06800.1 N 0.842
POPTR_0016s04830 Populus trichocarpa POPTR_0016s04830 N 0.842
Cla011853 Citrullus lanatus Cla011853 N 0.842
28582.m000316 Ricinus communis 28582.m000316 N 0.842
cassava12254.valid.m1 Manihot esculenta cassava12254.valid.m1 N 0.842
cassava12255.valid.m1 Manihot esculenta cassava12255.valid.m1 N 0.842
cassava39743.m1 Manihot esculenta cassava39743.m1 N 0.842
Cucsa.353890 Cucumis sativus Cucsa.353890 N 0.842
Bostr.13129s0292 Boechera stricta Bostr.13129s0292 N 0.842
Ciclev10012014m.g Citrus clementina Ciclev10012014m.g N 0.842
Lus10021035.g Linum usitatissimum Lus10021035.g N 0.842
orange1.1g018583m.g Citrus sinensis orange1.1g018583m.g N 0.842
SapurV1A.0018s0530 Salix purpurea SapurV1A.0018s0530 N 0.842
SapurV1A.0251s0040 Salix purpurea SapurV1A.0251s0040 N 0.842
Thhalv10013850m.g Eutrema salsugineum Thhalv10013850m.g N 0.842
Lus10023816.g Linum usitatissimum Lus10023816.g N 0.841
GLYMA09G17404 Glycine max GLYMA09G17404 N 0.834
MTR_1g053835 Medicago truncatula MTR_1g053835 N 0.834
POPTR_0006s20540 Populus trichocarpa POPTR_0006s20540 N 0.834
Aquca_009_00165 Aquilegia coerulea Aquca_009_00165 N 0.831
Aquca_012_00204 Aquilegia coerulea Aquca_012_00204 N 0.831
Ciclev10033388m.g Citrus clementina Ciclev10033388m.g N 0.831
orange1.1g035950m.g Citrus sinensis orange1.1g035950m.g N 0.831
evm.TU.supercontig_85.82 Carica papaya evm.TU.supercontig_85.82 N 0.827
Gorai.006G142000 Gossypium raimondii Gorai.006G142000 N 0.827
AT5G06800 Arabidopsis thaliana AT5G06800 N 0.824
30226.m001993 Ricinus communis 30226.m001993 N 0.820
GSMUA_Achr7G06370_001 Musa acuminata GSMUA_Achr7G06370_001 I 0.811
Bra009228 Brassica rapa Bra009228 I 0.800
SapurV1A.0008s0360 Salix purpurea SapurV1A.0008s0360 N 0.796
SapurV1A.4156s0010 Salix purpurea SapurV1A.4156s0010 N 0.796
GLYMA02G30800 Glycine max GLYMA02G30800 N 0.794
Ca_14198 Cicer arietinum Ca_14198 N 0.794
MTR_7g093030 Medicago truncatula MTR_7g093030 N 0.790
GSMUA_Achr4G19300_001 Musa acuminata GSMUA_Achr4G19300_001 I 0.789
VIT_08s0007g06180 Vitis vinifera VIT_08s0007g06180 I 0.786
PRUPE_ppa016067mg Prunus persica PRUPE_ppa016067mg N 0.785
Pm025973 Prunus mume Pm025973 N 0.785
gene22647-v1.0-hybrid Fragaria vesca gene22647-v1.0-hybrid N 0.785
MDP0000184307 Malus domestica MDP0000184307 N 0.785
MDP0000253656 Malus domestica MDP0000253656 N 0.785
Bo9g175820 Brassica oleracea Bo9g175820 I 0.782
Cagra.8005s0016 Capsella grandiflora Cagra.8005s0016 N 0.782
Carubv10003217m.g Capsella rubella Carubv10003217m.g N 0.782
POPTR_0001s23560 Populus trichocarpa POPTR_0001s23560 N 0.781
PK00827.1 Cannabis sativa PK00827.1 N 0.781
MDP0000280005 Malus domestica MDP0000280005 N 0.778
PGSC0003DMG400023674 Solanum tuberosum PGSC0003DMG400023674 N 0.762
Solyc10g080460.1 Solanum lycopersicum Solyc10g080460.1 N 0.762
Eucgr.A02444 Eucalyptus grandis Eucgr.A02444 N 0.761
GLYMA03G29940 Glycine max GLYMA03G29940 I 0.750
GLYMA19G32850 Glycine max GLYMA19G32850 I 0.750
VIT_13s0156g00390 Vitis vinifera VIT_13s0156g00390 I 0.749
cassava16780.m1 Manihot esculenta cassava16780.m1 I 0.742
GLYMA18G43130 Glycine max GLYMA18G43130 I 0.739
Aquca_004_00369 Aquilegia coerulea Aquca_004_00369 I 0.739
chr1.LjB18K24.110.nd Lotus japonicus chr1.LjB18K24.110.nd I 0.739
PDK_20s1349221g001 Phoenix dactylifera PDK_20s1349221g001 N 0.737
chr5.LjT42I01.50.nd Lotus japonicus chr5.LjT42I01.50.nd I 0.734
mgf015795m Mimulus guttatus mgf015795m N 0.731
BGIOSGA014151 Oryza indica BGIOSGA014151 I 0.730
BRADI5G25320 Brachypodium distachyon BRADI5G25320 I 0.730
GRMZM2G124495 Zea mays GRMZM2G124495 I 0.730
LPERR04G24240 Leersia perrieri LPERR04G24240 I 0.730
OB04G35670 Oryza brachyantha OB04G35670 I 0.730
OBART04G28680 Oryza barthii OBART04G28680 I 0.730
OGLUM04G28560 Oryza glumaepatula OGLUM04G28560 I 0.730
OLONG_005000 Oryza longistaminata OLONG_005000 I 0.730
OMERI04G24260 Oryza meridionalis OMERI04G24260 I 0.730
ONIVA04G27220 Oryza nivara ONIVA04G27220 I 0.730
OPUNC04G26200 Oryza punctata OPUNC04G26200 I 0.730
ORGLA04G0249600 Oryza glaberrima ORGLA04G0249600 I 0.730
ORUFI04G30350 Oryza rufipogon ORUFI04G30350 I 0.730
OS04G0665600 Oryza sativa OS04G0665600 I 0.730
Sb06g031970 Sorghum bicolor Sb06g031970 I 0.730
Si022099m.g Setaria italica Si022099m.g I 0.730
Pavir.Ga00160 Panicum virgatum Pavir.Ga00160 I 0.730
chr1.LjT38A19.30.nc Lotus japonicus chr1.LjT38A19.30.nc N 0.728
Pavir.J05593 Panicum virgatum Pavir.J05593 I 0.719
Eucgr.A00517 Eucalyptus grandis Eucgr.A00517 I 0.716
mgf017208m Mimulus guttatus mgf017208m N 0.711
MDP0000142146 Malus domestica MDP0000142146 I 0.710
MDP0000182154 Malus domestica MDP0000182154 I 0.710
MTR_7g068600 Medicago truncatula MTR_7g068600 N 0.706
VIT_13s0156g00370 Vitis vinifera VIT_13s0156g00370 N 0.706
VIT_08s0105g00370 Vitis vinifera VIT_08s0105g00370 I 0.702
MLOC_52271 Hordeum vulgare MLOC_52271 I 0.696
AMTR_s00022p00190540 Amborella trichopoda AMTR_s00022p00190540 I 0.693
Ca_07304 Cicer arietinum Ca_07304 I 0.689
GRMZM2G035370 Zea mays GRMZM2G035370 I 0.688
TCM_021688 Theobroma cacao TCM_021688 I 0.687
29701.m000580 Ricinus communis 29701.m000580 I 0.687
Lus10004809.g Linum usitatissimum Lus10004809.g I 0.687
Lus10005036.g Linum usitatissimum Lus10005036.g I 0.687
Lus10027806.g Linum usitatissimum Lus10027806.g I 0.687
AMTR_s00025p00224230 Amborella trichopoda AMTR_s00025p00224230 I 0.685
28582.m000318 Ricinus communis 28582.m000318 N 0.684
GLYMA18G43550 Glycine max GLYMA18G43550 I 0.683
PGSC0003DMG400015893 Solanum tuberosum PGSC0003DMG400015893 I 0.683
Solyc10g076460.1 Solanum lycopersicum Solyc10g076460.1 I 0.683
Cla018361 Citrullus lanatus Cla018361 I 0.683
Cucsa.130050 Cucumis sativus Cucsa.130050 I 0.683
gene13487-v1.0-hybrid Fragaria vesca gene13487-v1.0-hybrid I 0.683
Gorai.002G265400 Gossypium raimondii Gorai.002G265400 I 0.683
PK15677.1 Cannabis sativa PK15677.1 I 0.683
cassava12253.valid.m1 Manihot esculenta cassava12253.valid.m1 N 0.682
Gorai.006G182800 Gossypium raimondii Gorai.006G182800 I 0.680
POPTR_0006s10190 Populus trichocarpa POPTR_0006s10190 I 0.679
POPTR_0016s12430 Populus trichocarpa POPTR_0016s12430 I 0.679
GLYMA07G18870 Glycine max GLYMA07G18870 I 0.677
MTR_7g069660 Medicago truncatula MTR_7g069660 I 0.677
PRUPE_ppa021179mg Prunus persica PRUPE_ppa021179mg I 0.677
TCM_021628 Theobroma cacao TCM_021628 I 0.677
Ca_09400 Cicer arietinum Ca_09400 I 0.677
Pm002861 Prunus mume Pm002861 I 0.677
Eucgr.J01904 Eucalyptus grandis Eucgr.J01904 I 0.677
gene21014-v1.0-hybrid Fragaria vesca gene21014-v1.0-hybrid I 0.677
MDP0000272003 Malus domestica MDP0000272003 I 0.677
EuGene.0700010469 Micromonas sp RCC299 EuGene.0700010469 I 0.676
GLYMA01G31044 Glycine max GLYMA01G31044 I 0.675
SELMODRAFT_414222 Selaginella moellendorffii SELMODRAFT_414222 I 0.675
SELMODRAFT_422768 Selaginella moellendorffii SELMODRAFT_422768 I 0.675
SELMODRAFT_426960 Selaginella moellendorffii SELMODRAFT_426960 I 0.675
SELMODRAFT_438636 Selaginella moellendorffii SELMODRAFT_438636 I 0.675
Solyc02g080860.1 Solanum lycopersicum Solyc02g080860.1 I 0.675
estExt_fgenesh1_pg.C_1660037 Physcomitrella patens estExt_fgenesh1_pg.C_1660037 I 0.675
estExt_fgenesh1_pg.C_550102 Physcomitrella patens estExt_fgenesh1_pg.C_550102 I 0.675
Lus10002483.g Linum usitatissimum Lus10002483.g I 0.675
MDP0000133017 Malus domestica MDP0000133017 I 0.675
GSMUA_Achr10G23260_001 Musa acuminata GSMUA_Achr10G23260_001 I 0.674
POPTR_0007s15110 Populus trichocarpa POPTR_0007s15110 I 0.674
Eucgr.F04055 Eucalyptus grandis Eucgr.F04055 I 0.674
SapurV1A.0703s0050 Salix purpurea SapurV1A.0703s0050 I 0.674
PDK_20s1523411g004 Phoenix dactylifera PDK_20s1523411g004 I 0.674
OB02G12880 Oryza brachyantha OB02G12880 I 0.672
PRUPE_ppa023008mg Prunus persica PRUPE_ppa023008mg I 0.672
MDP0000241055 Malus domestica MDP0000241055 I 0.672
MDP0000773970 Malus domestica MDP0000773970 I 0.672
Gorai.001G225500 Gossypium raimondii Gorai.001G225500 N 0.671
Lus10022886.g Linum usitatissimum Lus10022886.g I 0.670
fgenesh2_pg.scaffold_82000058 Physcomitrella patens fgenesh2_pg.scaffold_82000058 I 0.669
Ciclev10013453m.g Citrus clementina Ciclev10013453m.g I 0.669
Gorai.009G329400 Gossypium raimondii Gorai.009G329400 I 0.669
orange1.1g025728m.g Citrus sinensis orange1.1g025728m.g I 0.669
POPTR_0014s00280 Populus trichocarpa POPTR_0014s00280 I 0.668
VIT_09s0054g01620 Vitis vinifera VIT_09s0054g01620 I 0.668
Ciclev10015819m.g Citrus clementina Ciclev10015819m.g I 0.668
orange1.1g038268m.g Citrus sinensis orange1.1g038268m.g I 0.668
OMERI02G06020 Oryza meridionalis OMERI02G06020 I 0.667
Sb05g000480 Sorghum bicolor Sb05g000480 I 0.667
VIT_13s0067g01500 Vitis vinifera VIT_13s0067g01500 I 0.667
GSMUA_Achr7G15740_001 Musa acuminata GSMUA_Achr7G15740_001 I 0.666
PGSC0003DMG400030032 Solanum tuberosum PGSC0003DMG400030032 I 0.665
Solyc02g080740.1 Solanum lycopersicum Solyc02g080740.1 N 0.665
Solyc06g051060.2 Solanum lycopersicum Solyc06g051060.2 I 0.665
28582.m000317 Ricinus communis 28582.m000317 N 0.665
evm.TU.supercontig_120.33 Carica papaya evm.TU.supercontig_120.33 I 0.665
Gorai.012G117800 Gossypium raimondii Gorai.012G117800 I 0.665
est_orfs.1_306_4269596:1 Micromonas pusilla est_orfs.1_306_4269596:1 I 0.664
Si039234m.g Setaria italica Si039234m.g I 0.663
Pavir.J33581 Panicum virgatum Pavir.J33581 I 0.663
F775_12865 Aegilops tauschii F775_12865 I 0.661
Traes_2AL_8D3A3687D Triticum aestivum Traes_2AL_8D3A3687D I 0.661
Traes_2BL_FA727026F Triticum aestivum Traes_2BL_FA727026F I 0.661