Gorai.011G029700 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.011G029700 T008681_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK17878.1
M01099_2.00 		Cannabis sativa
CGCCGYCR
YGRCGGCG		 PBM
Lambert et al.(2019)
pTH10133 		0.820 1.000
OS05G0497200
M01636_2.00 		Oryza sativa
CGSCGCCR
YGGCGSCG		 PBM
Weirauch et al.(2014)
pTH8640 		0.747 0.851
ERF3
M01607_2.00 		Arabidopsis thaliana
CGCCGSCR
YGSCGGCG		 PBM
Weirauch et al.(2014)
pTH8109 		0.734 0.787
ERF3
M06584_2.00 		Arabidopsis thaliana
YHDYCKCCGCCGYHD
HDRCGGCGGMGRHDR		 Dap-seq
OMalley et al.(2016)
ERF3_col_a 		0.734 0.787
ERF3
M06585_2.00 		Arabidopsis thaliana
NNHHDNHNNYDCCGCCGYCR
YGRCGGCGGHRNNDNHDDNN		 Dap-seq
OMalley et al.(2016)
ERF3_colamp_a 		0.734 0.787
ERF9
M06670_2.00 		Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN
NDRHDRHDDHGRCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF9_col_a 		0.722 0.787
ERF9
M06671_2.00 		Arabidopsis thaliana
NNHDSCGCCGYCRHWDN
NHWDYGRCGGCGSHDNN		 Dap-seq
OMalley et al.(2016)
ERF9_colamp_a 		0.722 0.787
PK19363.1
M01100_2.00 		Cannabis sativa
NMGCCGHMNN
NNKDCGGCKN		 PBM
Lambert et al.(2019)
pTH10138 		0.722 0.809
PK19363.1
M01643_2.00 		Cannabis sativa
CGCCGYCD
HGRCGGCG		 PBM
Weirauch et al.(2014)
pTH9609 		0.722 0.809
ERF4_TOBAC
M09728_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_02 		0.712 0.787
ERF4
M01616_2.00 		Arabidopsis thaliana
VCGCCGCC
GGCGGCGB		 PBM
Weirauch et al.(2014)
pTH8156 		0.700 0.809
ERF4
M06616_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRHHD
HDDYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF4_col_a 		0.700 0.809
ERF4
M06617_2.00 		Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN
NNHDDYGRCGGCGSNDNNDN		 Dap-seq
OMalley et al.(2016)
ERF4_colamp_a 		0.700 0.809
Q5Y836_TOBAC
M09732_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF5_02 		0.689 0.766
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.011G029700.1 AP2 7 58

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

392 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK15505.1 Cannabis sativa PK15505.1 D
Gorai.001G012400 Gossypium raimondii Gorai.001G012400 I
Cucsa.117060 Cucumis sativus Cucsa.117060 I
mgf018190m Mimulus guttatus mgf018190m I
Aquca_020_00438 Aquilegia coerulea Aquca_020_00438 I
Bostr.26833s0565 Boechera stricta Bostr.26833s0565 I
Cagra.1569s0004 Capsella grandiflora Cagra.1569s0004 I
Carubv10026331m.g Capsella rubella Carubv10026331m.g I
Ciclev10007937m.g Citrus clementina Ciclev10007937m.g I
Eucgr.C03476 Eucalyptus grandis Eucgr.C03476 I
gene12658-v1.0-hybrid Fragaria vesca gene12658-v1.0-hybrid I
cassava46879.m1 Manihot esculenta cassava46879.m1 I
MDP0000119495 Malus domestica MDP0000119495 I
MDP0000252899 Malus domestica MDP0000252899 I
MDP0000782908 Malus domestica MDP0000782908 I
orange1.1g008967m.g Citrus sinensis orange1.1g008967m.g I
Pavir.Ca00825 Panicum virgatum Pavir.Ca00825 I
Pavir.J01638 Panicum virgatum Pavir.J01638 I
Thhalv10013360m.g Eutrema salsugineum Thhalv10013360m.g I
LjT02N03.60.nd Lotus japonicus LjT02N03.60.nd I
OPUNC05G05910 Oryza punctata OPUNC05G05910 I
AT5G56960 Arabidopsis thaliana AT5G56960 I
Bo2g032920 Brassica oleracea Bo2g032920 I
Bra035639 Brassica rapa Bra035639 I
GLYMA09G07391 Glycine max GLYMA09G07391 I
GLYMA15G18580 Glycine max GLYMA15G18580 I
GSMUA_Achr6G00900_001 Musa acuminata GSMUA_Achr6G00900_001 I
Al_scaffold_0008_2143 Arabidopsis lyrata Al_scaffold_0008_2143 I
PGSC0003DMG400000335 Solanum tuberosum PGSC0003DMG400000335 I
POPTR_0006s15310 Populus trichocarpa POPTR_0006s15310 I
PRUPE_ppa020972mg Prunus persica PRUPE_ppa020972mg I
Si024546m.g Setaria italica Si024546m.g I
TCM_037645 Theobroma cacao TCM_037645 I
VIT_11s0016g02070 Vitis vinifera VIT_11s0016g02070 I
Cla017100 Citrullus lanatus Cla017100 I
29912.m005337 Ricinus communis 29912.m005337 I
cassava25701.m1 Manihot esculenta cassava25701.m1 I
MTR_2g039620 Medicago truncatula MTR_2g039620 N
GSMUA_Achr7G09080_001 Musa acuminata GSMUA_Achr7G09080_001 N
GRMZM2G175480 Zea mays GRMZM2G175480 N