CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Lus10002855.g
(
Linum usitatissimum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Lus10002855.g
T008727_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10002855
AP2
62
121
CSYRGVRQRTWGKWVAEIREPVLITGSTKKKGSRLWLGTFDTAVEAAMAYDNAARSMYGG
Links
Other
AP2
family TFs
Other
Linum usitatissimum
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo2g016490
Brassica oleracea
Bo2g016490
I
0.680
Bra023674
Brassica rapa
Bra023674
I
0.680
MTR_5g083330
Medicago truncatula
MTR_5g083330
I
0.684
Solyc04g050750.1
Solanum lycopersicum
Solyc04g050750.1
I
0.684
TCM_043302
Theobroma cacao
TCM_043302
I
0.692
TCM_043306
Theobroma cacao
TCM_043306
I
0.692
Aquca_004_00452
Aquilegia coerulea
Aquca_004_00452
I
0.683
Gorai.011G235900
Gossypium raimondii
Gorai.011G235900
I
0.691
Lus10012226.g
Linum usitatissimum
Lus10012226.g
I
0.703
Lus10023633.g
Linum usitatissimum
Lus10023633.g
I
0.679
Lus10034902.g
Linum usitatissimum
Lus10034902.g
I
0.679
PK07829.1
Cannabis sativa
PK07829.1
I
0.683
Solyc10g076380.1
Solanum lycopersicum
Solyc10g076380.1
N
0.721