Bo5g081270 (Brassica oleracea)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bo5g081270 T018688_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G51120
M01696_2.00 		Arabidopsis thaliana
NNNNYRNNNN
NNNNYRNNNN		 PBM
Weirauch et al.(2014)
pTH8659 		0.760 0.760
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g081270.1 B3 171 281

Links

Other B3 family TFs
Other Brassica oleracea TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT1G51120 Arabidopsis thaliana AT1G51120 D 0.760
Thhalv10012356m.g Eutrema salsugineum Thhalv10012356m.g I 0.760
AT1G50680 Arabidopsis thaliana AT1G50680 I 0.750
Thhalv10012161m.g Eutrema salsugineum Thhalv10012161m.g I 0.719
Thhalv10012152m.g Eutrema salsugineum Thhalv10012152m.g I 0.750
Carubv10011592m.g Capsella rubella Carubv10011592m.g I 0.875
Carubv10011257m.g Capsella rubella Carubv10011257m.g I 0.719
Cagra.2093s0004 Capsella grandiflora Cagra.2093s0004 I 0.875
Bostr.26675s0109 Boechera stricta Bostr.26675s0109 I 0.760
Bostr.26675s0076 Boechera stricta Bostr.26675s0076 I 0.781
fgenesh2_kg.1__4181__AT1G51120.1 Arabidopsis lyrata fgenesh2_kg.1__4181__AT1G51120.1 I 0.760
fgenesh2_kg.1__4154__AT1G50680.1 Arabidopsis lyrata fgenesh2_kg.1__4154__AT1G50680.1 I 0.763
Bra030458 Brassica rapa Bra030458 I 0.979
Bra018869 Brassica rapa Bra018869 I 0.720
Bra018854 Brassica rapa Bra018854 I 0.719
Bo6g024770 Brassica oleracea Bo6g024770 I 0.771
Bo6g022450 Brassica oleracea Bo6g022450 I 0.787
Bo6g022280 Brassica oleracea Bo6g022280 I 0.729