CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0891s0022
(
Capsella grandiflora
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Cagra.0891s0022
T022733_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0891s0022.1.p
B3
157
248
FVKSMLRSHVYSCFWLGLPSGFCVDNFSEETIEVVLEDEEGEEYEAVYIGKRTGLSGGWKRFALDHKLDDGDALLFELVEPKRFKIYVFRGN
Links
Other
B3
family TFs
Other
Capsella grandiflora
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10007308m.g
Citrus clementina
Ciclev10007308m.g
N
Sb08g005330
Sorghum bicolor
Sb08g005330
N
Si000431m.g
Setaria italica
Si000431m.g
N
Si034159m.g
Setaria italica
Si034159m.g
N
Solyc10g080090.1
Solanum lycopersicum
Solyc10g080090.1
N
Solyc12g009640.1
Solanum lycopersicum
Solyc12g009640.1
N
TCM_038144
Theobroma cacao
TCM_038144
N
Traes_4AL_54F25AA7C
Triticum aestivum
Traes_4AL_54F25AA7C
N
Traes_4AL_A494372EB
Triticum aestivum
Traes_4AL_A494372EB
N
Traes_4BS_5B1737D7C
Triticum aestivum
Traes_4BS_5B1737D7C
N
Traes_4BS_D5227ED8B
Triticum aestivum
Traes_4BS_D5227ED8B
N
Traes_4DS_990D31BB1
Triticum aestivum
Traes_4DS_990D31BB1
N
Traes_4DS_9C5CECE46
Triticum aestivum
Traes_4DS_9C5CECE46
N
VIT_11s0016g05750
Vitis vinifera
VIT_11s0016g05750
N
mgf025287m
Mimulus guttatus
mgf025287m
N
Bostr.0556s0643
Boechera stricta
Bostr.0556s0643
N
Sb02g043380
Sorghum bicolor
Sb02g043380
N
Eucgr.C01383
Eucalyptus grandis
Eucgr.C01383
N
gene30791-v1.0-hybrid
Fragaria vesca
gene30791-v1.0-hybrid
N
gene31107-v1.0-hybrid
Fragaria vesca
gene31107-v1.0-hybrid
N
Lus10032337.g
Linum usitatissimum
Lus10032337.g
N
MDP0000394762
Malus domestica
MDP0000394762
N
orange1.1g002915m.g
Citrus sinensis
orange1.1g002915m.g
N
Pavir.Ea02468
Panicum virgatum
Pavir.Ea02468
N
Pavir.Eb00995
Panicum virgatum
Pavir.Eb00995
N
Pavir.Eb00997
Panicum virgatum
Pavir.Eb00997
N
Pavir.Ia00683
Panicum virgatum
Pavir.Ia00683
N
Pavir.J05554
Panicum virgatum
Pavir.J05554
N
Pavir.J31170
Panicum virgatum
Pavir.J31170
N
SapurV1A.0197s0170
Salix purpurea
SapurV1A.0197s0170
N
PK27100.1
Cannabis sativa
PK27100.1
N
MLOC_66012
Hordeum vulgare
MLOC_66012
N
BGIOSGA018468
Oryza indica
BGIOSGA018468
N
BGIOSGA020445
Oryza indica
BGIOSGA020445
N
BRADI1G09650
Brachypodium distachyon
BRADI1G09650
N
BRADI1G09660
Brachypodium distachyon
BRADI1G09660
N
BRADI3G16050
Brachypodium distachyon
BRADI3G16050
N
BRADI3G40810
Brachypodium distachyon
BRADI3G40810
N
GLYMA13G22855
Glycine max
GLYMA13G22855
N
GLYMA13G22881
Glycine max
GLYMA13G22881
N
GLYMA16G32921
Glycine max
GLYMA16G32921
N
GLYMA17G11981
Glycine max
GLYMA17G11981
N
GSMUA_Achr10G16260_001
Musa acuminata
GSMUA_Achr10G16260_001
N
GSMUA_Achr3G02770_001
Musa acuminata
GSMUA_Achr3G02770_001
N
GSMUA_Achr3G16690_001
Musa acuminata
GSMUA_Achr3G16690_001
N
GSMUA_Achr8G29120_001
Musa acuminata
GSMUA_Achr8G29120_001
N
HAT
Arabidopsis thaliana
AT3G42170
N
MLOC_75540
Hordeum vulgare
MLOC_75540
N
OB03G40190
Oryza brachyantha
OB03G40190
N
OB08G27840
Oryza brachyantha
OB08G27840
N
OB08G27850
Oryza brachyantha
OB08G27850
N
ORGLA03G0300400
Oryza glaberrima
ORGLA03G0300400
N
ORGLA05G0072400
Oryza glaberrima
ORGLA05G0072400
N
ORGLA05G0236800
Oryza glaberrima
ORGLA05G0236800
N
ORGLA05G0237000
Oryza glaberrima
ORGLA05G0237000
N
OS03G0733400
Oryza sativa
OS03G0733400
N
OS05G0583200
Oryza sativa
OS05G0583200
N
PGSC0003DMG400002911
Solanum tuberosum
PGSC0003DMG400002911
N
PGSC0003DMG400023690
Solanum tuberosum
PGSC0003DMG400023690
N
PRUPE_ppa001983mg
Prunus persica
PRUPE_ppa001983mg
N
Sb01g009090
Sorghum bicolor
Sb01g009090
N