C1orf35 (Otolemur garnettii)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF06217 (GAGA_bind) IPR010409 ENSOGAG00000010978 T024581_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BPC1
M06715_2.00 		Arabidopsis thaliana
GAGAGAGAGAGAGAGAGAGAGAGA
TCTCTCTCTCTCTCTCTCTCTCTC		 Dap-seq
OMalley et al.(2016)
BPC1_col_a 		1.000 1.000
BPC1
M06716_2.00 		Arabidopsis thaliana
RAGAGAGAGARAGAR
YTCTYTCTCTCTCTY		 Dap-seq
OMalley et al.(2016)
BPC1_colamp_a 		1.000 1.000
BPC1
M09775_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BPC1_Q2 		1.000 1.000
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000009824 BBR 6 236

Links

Other BBR family TFs
Other Otolemur garnettii TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB98 Arabidopsis thaliana AT4G18770 D
BGIOSGA022369 Oryza indica BGIOSGA022369 I
BGIOSGA036541 Oryza indica BGIOSGA036541 I
Bo1g019910 Brassica oleracea Bo1g019910 I
Bo2g028290 Brassica oleracea Bo2g028290 I
Bo3g018490 Brassica oleracea Bo3g018490 I
Bo3g157300 Brassica oleracea Bo3g157300 I
Bra006744 Brassica rapa Bra006744 I
Bra013346 Brassica rapa Bra013346 I
Bra020346 Brassica rapa Bra020346 I
F775_22212 Aegilops tauschii F775_22212 I
fgenesh2_kg.3__2684__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.3__2684__AT5G58850.1 I
GLYMA05G02300 Glycine max GLYMA05G02300 I
GLYMA06G19280 Glycine max GLYMA06G19280 I
GRMZM5G870592 Zea mays GRMZM5G870592 I
LPERR06G03780 Leersia perrieri LPERR06G03780 I
LPERR12G04190 Leersia perrieri LPERR12G04190 I
OB06G13860 Oryza brachyantha OB06G13860 I
OBART06G04170 Oryza barthii OBART06G04170 I
OBART12G04480 Oryza barthii OBART12G04480 I
OBART12G04500 Oryza barthii OBART12G04500 I
OGLUM06G04280 Oryza glumaepatula OGLUM06G04280 I
OGLUM12G05330 Oryza glumaepatula OGLUM12G05330 I
OLONG_008158 Oryza longistaminata OLONG_008158 I
OLONG_010000 Oryza longistaminata OLONG_010000 I
OMERI06G04840 Oryza meridionalis OMERI06G04840 I
OMERI12G02760 Oryza meridionalis OMERI12G02760 I
ONIVA06G05390 Oryza nivara ONIVA06G05390 I
ONIVA12G04220 Oryza nivara ONIVA12G04220 I
OPUNC06G03990 Oryza punctata OPUNC06G03990 I
OPUNC12G04510 Oryza punctata OPUNC12G04510 I
ORGLA06G0038500 Oryza glaberrima ORGLA06G0038500 I
ORGLA12G0042300 Oryza glaberrima ORGLA12G0042300 I
ORUFI06G04170 Oryza rufipogon ORUFI06G04170 I
ORUFI12G05180 Oryza rufipogon ORUFI12G05180 I
OS06G0162700 Oryza sativa OS06G0162700 I
POPTR_0015s08880 Populus trichocarpa POPTR_0015s08880 I
PRUPE_ppa018123mg Prunus persica PRUPE_ppa018123mg I
PRUPE_ppa026791mg Prunus persica PRUPE_ppa026791mg I
Sb01g005100 Sorghum bicolor Sb01g005100 I
Si039046m.g Setaria italica Si039046m.g I
TCM_012087 Theobroma cacao TCM_012087 I
Traes_1BL_4D9406708 Triticum aestivum Traes_1BL_4D9406708 I
Traes_1DL_918A8F357 Triticum aestivum Traes_1DL_918A8F357 I
Traes_7AS_A337F362A Triticum aestivum Traes_7AS_A337F362A I
Traes_7BS_D28CCE3B8 Triticum aestivum Traes_7BS_D28CCE3B8 I
Traes_7DS_E27ECBC6E Triticum aestivum Traes_7DS_E27ECBC6E I
TRIUR3_12421 Triticum urartu TRIUR3_12421 I
MYB98 Vitis vinifera VIT_17s0000g08550 I
Ca_17294 Cicer arietinum Ca_17294 I
Cla019490 Citrullus lanatus Cla019490 I
Pm000541 Prunus mume Pm000541 I
Pm024743 Prunus mume Pm024743 I
30147.m013937 Ricinus communis 30147.m013937 I
cassava19706.m1 Manihot esculenta cassava19706.m1 I
cassava33974.m1 Manihot esculenta cassava33974.m1 I
Cucsa.196850 Cucumis sativus Cucsa.196850 I
Bostr.30275s0352 Boechera stricta Bostr.30275s0352 I
Cagra.0891s0081 Capsella grandiflora Cagra.0891s0081 I
Cagra.4306s0015 Capsella grandiflora Cagra.4306s0015 I
Carubv10006734m.g Capsella rubella Carubv10006734m.g I
Carubv10028458m.g Capsella rubella Carubv10028458m.g I
Ciclev10024427m.g Citrus clementina Ciclev10024427m.g I
Eucgr.B00301 Eucalyptus grandis Eucgr.B00301 I
gene08006-v1.0-hybrid Fragaria vesca gene08006-v1.0-hybrid I
gene32198-v1.0-hybrid Fragaria vesca gene32198-v1.0-hybrid I
Gorai.008G295800 Gossypium raimondii Gorai.008G295800 I
Lus10002384.g Linum usitatissimum Lus10002384.g I
Lus10027695.g Linum usitatissimum Lus10027695.g I
Lus10039966.g Linum usitatissimum Lus10039966.g I
Lus10042111.g Linum usitatissimum Lus10042111.g I
MDP0000215359 Malus domestica MDP0000215359 I
MDP0000319656 Malus domestica MDP0000319656 I
orange1.1g046859m.g Citrus sinensis orange1.1g046859m.g I
Pavir.J02497 Panicum virgatum Pavir.J02497 I
Pavir.J02718 Panicum virgatum Pavir.J02718 I
Pavir.J25000 Panicum virgatum Pavir.J25000 I
Pavir.J37434 Panicum virgatum Pavir.J37434 I
SapurV1A.0396s0170 Salix purpurea SapurV1A.0396s0170 I
SapurV1A.2163s0040 Salix purpurea SapurV1A.2163s0040 I
Thhalv10016057m.g Eutrema salsugineum Thhalv10016057m.g I
Thhalv10026824m.g Eutrema salsugineum Thhalv10026824m.g I
MYB64 Arabidopsis thaliana AT5G11050 N
MYB64 Arabidopsis lyrata fgenesh2_kg.6__1071__AT5G11050.1 N
GLYMA02G39070 Glycine max GLYMA02G39070 N
GLYMA14G37140 Glycine max GLYMA14G37140 N
GLYMA18G07360 Glycine max GLYMA18G07360 N
GSMUA_Achr6G33700_001 Musa acuminata GSMUA_Achr6G33700_001 N
MTR_3g463400 Medicago truncatula MTR_3g463400 N
MTR_5g070020 Medicago truncatula MTR_5g070020 N
PGSC0003DMG400044141 Solanum tuberosum PGSC0003DMG400044141 N
POPTR_0001s25710 Populus trichocarpa POPTR_0001s25710 N
POPTR_0009s04870 Populus trichocarpa POPTR_0009s04870 N
Solyc06g076840.1 Solanum lycopersicum Solyc06g076840.1 N
TCM_041651 Theobroma cacao TCM_041651 N
Cla008304 Citrullus lanatus Cla008304 N
29681.m001315 Ricinus communis 29681.m001315 N
cassava26507.m1 Manihot esculenta cassava26507.m1 N
cassava26674.m1 Manihot esculenta cassava26674.m1 N
Cucsa.146980 Cucumis sativus Cucsa.146980 N
Bostr.20821s0001 Boechera stricta Bostr.20821s0001 N
Bostr.23997s0007 Boechera stricta Bostr.23997s0007 N
Cagra.1398s0045 Capsella grandiflora Cagra.1398s0045 N
Carubv10003695m.g Capsella rubella Carubv10003695m.g N
Ciclev10030254m.g Citrus clementina Ciclev10030254m.g N
evm.TU.supercontig_112.44 Carica papaya evm.TU.supercontig_112.44 N
Gorai.001G115300 Gossypium raimondii Gorai.001G115300 N
Gorai.011G044100 Gossypium raimondii Gorai.011G044100 N
Lus10018220.g Linum usitatissimum Lus10018220.g N
Lus10040684.g Linum usitatissimum Lus10040684.g N
MDP0000555913 Malus domestica MDP0000555913 N
orange1.1g046581m.g Citrus sinensis orange1.1g046581m.g N
SapurV1A.0772s0150 Salix purpurea SapurV1A.0772s0150 N
Thhalv10015404m.g Eutrema salsugineum Thhalv10015404m.g N
Thhalv10027294m.g Eutrema salsugineum Thhalv10027294m.g N
chr4.CM0042.120.nd Lotus japonicus chr4.CM0042.120.nd N
LjSGA_147332.1 Lotus japonicus LjSGA_147332.1 N
PDK_20s1782461g001 Phoenix dactylifera PDK_20s1782461g001 N