POPTR_0019s00540 (Populus trichocarpa)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 POPTR_0019s00540 T027389_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0019s00540.1 BED ZF 6 54

Links

Other BED ZF family TFs
Other Populus trichocarpa TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZBTB42 Homo sapiens ENSG00000179627 D 0.000
ENSPFOG00000010298 Poecilia formosa ENSPFOG00000010298 I 0.000
znf238.2 Xenopus tropicalis XB-GENE-1219066 I 0.000
Pvit_02527 Pogona vitticeps Pvit_02527 I 0.000
Ogr11588 Ophisaurus gracilis Ogr11588 I 0.000
ENSP00000409107 Macaca fascicularis ENSP00000409107 I 0.000
Alligator_sinensis_CCG020881.1 Alligator sinensis Alligator_sinensis_CCG020881.1 I 0.000
ENSXMAG00000006703 Xiphophorus maculatus ENSXMAG00000006703 I 0.000
zbtb42 Takifugu rubripes ENSTRUG00000013592 I 0.000
zbtb42 Tetraodon nigroviridis ENSTNIG00000000917 I 0.000
ENSSHAG00000008534 Sarcophilus harrisii ENSSHAG00000008534 I 0.000
ZBTB42 Pan troglodytes ENSPTRG00000040287 I 0.000
ZBTB42 Anolis carolinensis ENSACAG00000011451 I 0.000
zbtb42 Oryzias latipes ENSORLG00000017008 I 0.000
ENSONIG00000012149 Oreochromis niloticus ENSONIG00000012149 I 0.000
ZBTB42 Monodelphis domestica ENSMODG00000013701 I 0.000
ZBTB42 Meleagris gallopavo ENSMGAG00000015389 I 0.000
ENSLOCG00000012759 Lepisosteus oculatus ENSLOCG00000012759 I 0.000
ZBTB42 Gallus gallus ENSGALG00000023025 I 0.000
zbtb42 Gasterosteus aculeatus ENSGACG00000006297 I 0.000
zbtb42 Danio rerio ENSDARG00000102761 I 0.000
ENSAMEG00000007755 Ailuropoda melanoleuca ENSAMEG00000007755 I 0.000