Bra022738 (Brassica rapa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bra022738 T031480_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ILR3
M01714_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH7211 		0.914 0.961
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra022738.1-P bHLH 73 123

Links

Other bHLH family TFs
Other Brassica rapa TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene31749-v1.0-hybrid Fragaria vesca gene31749-v1.0-hybrid N 0.000
PK22905.1 Cannabis sativa PK22905.1 N 0.000
SapurV1A.0325s0140 Salix purpurea SapurV1A.0325s0140 N 0.000
SapurV1A.0324s0040 Salix purpurea SapurV1A.0324s0040 N 0.000
orange1.1g042460m.g Citrus sinensis orange1.1g042460m.g N 0.000
MDP0000275704 Malus domestica MDP0000275704 N 0.000
Lus10028934.g Linum usitatissimum Lus10028934.g N 0.000
Lus10004353.g Linum usitatissimum Lus10004353.g N 0.000
Gorai.008G238300 Gossypium raimondii Gorai.008G238300 N 0.000
Gorai.004G200600 Gossypium raimondii Gorai.004G200600 N 0.000
Gorai.003G170700 Gossypium raimondii Gorai.003G170700 N 0.000
POPTR_0001s00480 Populus trichocarpa POPTR_0001s00480 N 0.000
evm.TU.supercontig_29.139 Carica papaya evm.TU.supercontig_29.139 N 0.000
Ciclev10018916m.g Citrus clementina Ciclev10018916m.g N 0.000
Cucsa.320850 Cucumis sativus Cucsa.320850 N 0.000
cassava30062.valid.m1 Manihot esculenta cassava30062.valid.m1 N 0.000
29916.m000544 Ricinus communis 29916.m000544 N 0.000
Pm023512 Prunus mume Pm023512 N 0.000
Cla005738 Citrullus lanatus Cla005738 N 0.000
VIT_02s0154g00400 Vitis vinifera VIT_02s0154g00400 N 0.000
PRUPE_ppa001561mg Prunus persica PRUPE_ppa001561mg N 0.000
POPTR_0003s11020 Populus trichocarpa POPTR_0003s11020 N 0.000