arnt (Danio rerio)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSDARG00000021855 T033660_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arnt
M01719_2.00 		Mus musculus
NNKCACGTGMNN
NNKCACGTGMNN		 PBM
Weirauch et al.(2014)
pTH5111 		0.884 0.981
ARNT
M08732_2.00 		Homo sapiens
NKRCGTGMN
NKCACGYMN		 Misc
Kulakovskiy et al.(2013)
ARNT_HUMAN.H11MO.0.B 		0.884 0.981
ARNT
M09459_2.00 		Homo sapiens
KCACGTNN
NNACGTGM		 Misc
Heinz et al.(2010)
T47D-HIF1b_GSE59937 		0.884 0.981
ARNT
M09863_2.00 		Homo sapiens
NVNNNCACGTGNHHHN
NDDDNCACGTGNNNBN		 Transfac
Matys et al.(2006)
V$ARNT_01 		0.884 0.981
ARNT
M09864_2.00 		Homo sapiens
VVNNNRKCACGTGMYNNNBB
VVNNNRKCACGTGMYNNNBB		 Transfac
Matys et al.(2006)
V$ARNT_02 		0.884 0.981
ARNT
M09865_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ARNT_Q6_01 		0.884 0.981
ARNT
M09866_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ARNT_Q6 		0.884 0.981
tgo
M06005_2.00 		Drosophila melanogaster
RDDTCGTGAYY
RRTCACGAHHY		 B1H
Zhu et al.(2011)
dys_tgo_SANGER_5_FBgn0015014 		0.884 0.907
tgo
M06006_2.00 		Drosophila melanogaster
SDTTGCGTGAC
GTCACGCAAHS		 B1H
Zhu et al.(2011)
ss_tgo_SANGER_10_FBgn0015014 		0.884 0.907
tgo
M06007_2.00 		Drosophila melanogaster
KCACGTGAC
GTCACGTGM		 B1H
Zhu et al.(2011)
tgo_cyc_SANGER_5_FBgn0015014 		0.884 0.907
tgo
M06008_2.00 		Drosophila melanogaster
RTACGTGAC
GTCACGTAY		 B1H
Zhu et al.(2011)
tgo_sima_SANGER_5_FBgn0015014 		0.884 0.907
tgo
M06009_2.00 		Drosophila melanogaster
VWACGTGACY
RGTCACGTWB		 B1H
Zhu et al.(2011)
tgo_sim_SANGER_5_FBgn0015014 		0.884 0.907
tgo
M06010_2.00 		Drosophila melanogaster
TGCGTGAC
GTCACGCA		 B1H
Zhu et al.(2011)
tgo_ss_SANGER_5_FBgn0015014 		0.884 0.907
tgo
M06011_2.00 		Drosophila melanogaster
RCACGTGAC
GTCACGTGY		 B1H
Zhu et al.(2011)
tgo_tai_SANGER_5_FBgn0015014 		0.884 0.907
tgo
M06012_2.00 		Drosophila melanogaster
VTACGTGACB
VGTCACGTAB		 B1H
Zhu et al.(2011)
tgo_trh_SANGER_5_FBgn0015014 		0.884 0.907
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000028315 bHLH 64 117
ENSDARP00000076292 bHLH 64 117
ENSDARP00000107928 bHLH 64 117
ENSDARP00000110017 bHLH 64 117
ENSDARP00000112110 bHLH 64 117

Links

Other bHLH family TFs
Other Danio rerio TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Snai1 Mus musculus ENSMUSG00000042821 D
SNAI1 Homo sapiens ENSG00000124216 D
SNAI1 Otolemur garnettii ENSOGAG00000030111 I
ENSOARG00000013174 Ovis aries ENSOARG00000013174 I
ENSONIG00000020305 Oreochromis niloticus ENSONIG00000020305 I
ENSPANG00000007536 Papio anubis ENSPANG00000007536 I
SNAI1 Procavia capensis ENSPCAG00000011934 I
ENSPFOG00000015709 Poecilia formosa ENSPFOG00000015709 I
SNAI1 Pan troglodytes ENSPTRG00000013614 I
SNAI1 Pteropus vampyrus ENSPVAG00000004119 I
Snai1 Rattus norvegicus ENSRNOG00000009594 I
ENSSTOG00000005866 Ictidomys tridecemlineatus ENSSTOG00000005866 I
SNAI1 Tupaia belangeri ENSTBEG00000012262 I
ENSTNIG00000004434 Tetraodon nigroviridis ENSTNIG00000004434 I
snai1a Tetraodon nigroviridis ENSTNIG00000007311 I
snai3 Takifugu rubripes ENSTRUG00000002385 I
snai1a Takifugu rubripes ENSTRUG00000012293 I
SNAI1 Tursiops truncatus ENSTTRG00000002029 I
ENSXMAG00000009637 Xiphophorus maculatus ENSXMAG00000009637 I
GM16048 Drosophila sechellia FBgn0170964 I
GB53867 Apis mellifera GB53867 I
ENSBTAP00000019345-D1 Bos grunniens ENSBTAP00000019345-D1 I
Myotis_brandtii_SNAI1_10026057 Myotis brandtii Myotis_brandtii_SNAI1_10026057 I
Myotis_brandtii_SNAI1_10026379 Myotis brandtii Myotis_brandtii_SNAI1_10026379 I
snai3 Xenopus tropicalis XB-GENE-488030 I
SNAI1 Felis catus ENSFCAG00000010558 I
SNAI1 Bos taurus ENSBTAG00000014554 I
SNAI1 Canis familiaris ENSCAFG00000011499 I
SNAI1 Callithrix jacchus ENSCJAG00000000518 I
SNAI1 Cavia porcellus ENSCPOG00000026663 I
ENSCSAG00000015065 Chlorocebus sabaeus ENSCSAG00000015065 I
snai3 Danio rerio ENSDARG00000031243 I
snai1a Danio rerio ENSDARG00000056995 I
SNAI1 Dasypus novemcinctus ENSDNOG00000023834 I
ENSDNOG00000024891 Dasypus novemcinctus ENSDNOG00000024891 I
SNAI1 Equus caballus ENSECAG00000009787 I
SNAI1 Oryctolagus cuniculus ENSOCUG00000005422 I
snai1a Gasterosteus aculeatus ENSGACG00000010147 I
SNAI1 Gorilla gorilla ENSGGOG00000024422 I
ENSGMOG00000017815 Gadus morhua ENSGMOG00000017815 I
SNAI1 Loxodonta africana ENSLAFG00000030265 I
ENSMICG00000011160 Microcebus murinus ENSMICG00000011160 I
ENSMLUG00000015053 Myotis lucifugus ENSMLUG00000015053 I
ENSMMUG00000019719 Macaca mulatta ENSMMUG00000019719 I
ENSMPUG00000017558 Mustela putorius furo ENSMPUG00000017558 I
ENSNLEG00000006985 Nomascus leucogenys ENSNLEG00000006985 I
ENSAMEG00000013478 Ailuropoda melanoleuca ENSAMEG00000013478 I