CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSFALG00000000552
(
Ficedula albicollis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSFALG00000000552
T034091_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NEUROD2
M02795_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Jolma et al.(2013)
NEUROD2_1
0.914
1.000
NEUROD2
M04160_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX
0.914
1.000
NEUROD2
M08737_2.00
Homo sapiens
RRCAGMTGG
CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B
0.914
1.000
Neurod2
M08770_2.00
Mus musculus
RVCAGATGGB
VCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A
0.914
1.000
NEUROD2
M04161_2.00
Homo sapiens
RMCATATGBY
RVCATATGKY
SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX
0.914
1.000
NEUROD1
M04148_2.00
Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY
SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX
0.879
0.962
NEUROD1
M08057_2.00
Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN
ChIP-seq
Mathelier et al.(2014)
MA1109.1
0.879
0.962
NEUROD1
M08735_2.00
Homo sapiens
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A
0.879
0.962
Neurod1
M08764_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A
0.879
0.962
Neurod1
M09474_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298
0.879
0.962
NEUROD1
M09873_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_01
0.879
0.962
NEUROD1
M09874_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_02
0.879
0.962
NEUROD1
M04149_2.00
Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY
SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX
0.879
0.962
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFALP00000000572
bHLH
112
164
RRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALS
Links
Other
bHLH
family TFs
Other
Ficedula albicollis
TFs
265 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Trp53
Mus musculus
ENSMUSG00000059552
D
TP53
Homo sapiens
ENSG00000141510
D
TP53
Macaca mulatta
ENSMMUG00000008639
I
ENSMLUG00000006411
Myotis lucifugus
ENSMLUG00000006411
I
ENSMODG00000007271
Monodelphis domestica
ENSMODG00000007271
I
ENSMPUG00000009017
Mustela putorius furo
ENSMPUG00000009017
I
ENSNLEG00000009730
Nomascus leucogenys
ENSNLEG00000009730
I
ENSOARG00000015571
Ovis aries
ENSOARG00000015571
I
ENSOCUG00000001138
Oryctolagus cuniculus
ENSOCUG00000001138
I
ENSOCUG00000022109
Oryctolagus cuniculus
ENSOCUG00000022109
I
TP53
Otolemur garnettii
ENSOGAG00000016871
I
TP53
Ochotona princeps
ENSOPRG00000006441
I
ENSPANG00000024061
Papio anubis
ENSPANG00000024061
I
TP53
Procavia capensis
ENSPCAG00000012725
I
ENSPSIG00000013302
Pelodiscus sinensis
ENSPSIG00000013302
I
TP53
Pan troglodytes
ENSPTRG00000008703
I
Tp53
Rattus norvegicus
ENSRNOG00000010756
I
LOC100910954
Rattus norvegicus
ENSRNOG00000046657
I
TP53
Sorex araneus
ENSSARG00000006206
I
ENSSHAG00000015510
Sarcophilus harrisii
ENSSHAG00000015510
I
TP53
Sus scrofa
ENSSSCG00000017950
I
ENSSTOG00000022774
Ictidomys tridecemlineatus
ENSSTOG00000022774
I
TP53
Tursiops truncatus
ENSTTRG00000010250
I
Cmyd_10000491
Chelonia mydas
Cmyd_10000491
I
ENSBTAP00000001420-D1
Bos grunniens
ENSBTAP00000001420-D1
I
ENSP00000269305
Macaca fascicularis
ENSP00000269305
I
Myotis_brandtii_TP53_10021059
Myotis brandtii
Myotis_brandtii_TP53_10021059
I
TP53
Gorilla gorilla
ENSGGOG00000009786
I
ENSAMEG00000016851
Ailuropoda melanoleuca
ENSAMEG00000016851
I
TP53
Bos taurus
ENSBTAG00000001069
I
TP53
Canis familiaris
ENSCAFG00000016714
I
TP53
Callithrix jacchus
ENSCJAG00000014978
I
TP53
Cavia porcellus
ENSCPOG00000014252
I
ENSCSAG00000011345
Chlorocebus sabaeus
ENSCSAG00000011345
I
tp53
Danio rerio
ENSDARG00000035559
I
TP53
Dasypus novemcinctus
ENSDNOG00000005252
I
TP53
Equus caballus
ENSECAG00000008126
I
TP53
Erinaceus europaeus
ENSEEUG00000014573
I
ENSETEG00000008987
Echinops telfairi
ENSETEG00000008987
I
TP53
Felis catus
ENSFCAG00000009623
I
ENSMLUG00000025140
Myotis lucifugus
ENSMLUG00000025140
I
ENSLAFG00000007483
Loxodonta africana
ENSLAFG00000007483
I
ENSLAFG00000027365
Loxodonta africana
ENSLAFG00000027365
I
ENSLAFG00000027474
Loxodonta africana
ENSLAFG00000027474
I
ENSLAFG00000028299
Loxodonta africana
ENSLAFG00000028299
I
ENSLAFG00000028692
Loxodonta africana
ENSLAFG00000028692
I
ENSLAFG00000030555
Loxodonta africana
ENSLAFG00000030555
I
ENSLAFG00000030880
Loxodonta africana
ENSLAFG00000030880
I
ENSLAFG00000032042
Loxodonta africana
ENSLAFG00000032042
I
ENSMEUG00000013135
Macropus eugenii
ENSMEUG00000013135
I
TP53
Microcebus murinus
ENSMICG00000014853
I
ENSACAG00000022533
Anolis carolinensis
ENSACAG00000022533
I
ENSLAFG00000027348
Loxodonta africana
ENSLAFG00000027348
N