CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TAL1
(
Homo sapiens
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSG00000162367
T034301_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TAL1
M08734_2.00
Homo sapiens
BSTTATCWSNNNNNNVCVV
BBGBNNNNNNSWGATAASV
Misc
Kulakovskiy et al.(2013)
TAL1_HUMAN.H11MO.0.A
(Direct)
(Direct)
TAL1
M09870_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TAL1_01
(Direct)
(Direct)
TAL1
M09871_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TAL1_Q6_01
(Direct)
(Direct)
TAL1
M09872_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TAL1_Q6
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tal1
M08759_2.00
Mus musculus
BYKBNNNNNNVWGATAAVVN
NBBTTATCWBNNNNNNVMRV
Misc
Kulakovskiy et al.(2013)
TAL1_MOUSE.H11MO.0.A
0.914
1.000
Tal1
M09471_2.00
Mus musculus
NVCWKMWG
CWKMWGBN
Misc
Heinz et al.(2010)
HPC7-Scl_GSE13511
0.914
1.000
Tal1
M09472_2.00
Mus musculus
YTATCWSNNNNNNVCAGVHN
NDBCTGBNNNNNNSWGATAR
Misc
Heinz et al.(2010)
Ter119-SCL_GSE18720
0.914
1.000
LYL1
M08714_2.00
Homo sapiens
VNRRNVVCAGMWGN
NCWKCTGBBNYYNB
Misc
Kulakovskiy et al.(2013)
LYL1_HUMAN.H11MO.0.A
0.888
0.885
Lyl1
M08763_2.00
Mus musculus
VNRRNVVCAGMWGN
NCWKCTGBBNYYNB
Misc
Kulakovskiy et al.(2013)
LYL1_MOUSE.H11MO.0.A
0.853
0.865
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000294339
bHLH
188
240
RRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
ENSP00000360951
bHLH
188
240
RRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
Links
Other
bHLH
family TFs
Other
Homo sapiens
TFs
225 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.0578s0028
Capsella grandiflora
Cagra.0578s0028
N
0.000
Pm028948
Prunus mume
Pm028948
N
0.000
Pm028949
Prunus mume
Pm028949
N
0.000
Pm031098
Prunus mume
Pm031098
N
0.000
Pm031103
Prunus mume
Pm031103
N
0.000
27751.m000169
Ricinus communis
27751.m000169
N
0.000
Cucsa.371810
Cucumis sativus
Cucsa.371810
N
0.000
Bostr.20505s0055
Boechera stricta
Bostr.20505s0055
N
0.000
Bostr.20505s0056
Boechera stricta
Bostr.20505s0056
N
0.000
Cagra.0578s0027
Capsella grandiflora
Cagra.0578s0027
N
0.000
VIT_08s0007g05300
Vitis vinifera
VIT_08s0007g05300
N
0.000
Carubv10017770m.g
Capsella rubella
Carubv10017770m.g
N
0.000
Carubv10019130m.g
Capsella rubella
Carubv10019130m.g
N
0.000
MDP0000641681
Malus domestica
MDP0000641681
N
0.000
SapurV1A.0159s0010
Salix purpurea
SapurV1A.0159s0010
N
0.000
SapurV1A.0196s0420
Salix purpurea
SapurV1A.0196s0420
N
0.000
SapurV1A.0196s0430
Salix purpurea
SapurV1A.0196s0430
N
0.000
Thhalv10006189m.g
Eutrema salsugineum
Thhalv10006189m.g
N
0.000
Thhalv10006191m.g
Eutrema salsugineum
Thhalv10006191m.g
N
0.000
Bra014654
Brassica rapa
Bra014654
N
0.000
ORG3
Arabidopsis thaliana
AT3G56980
N
0.000
Bo01495s010
Brassica oleracea
Bo01495s010
N
0.000
Bo4g112570
Brassica oleracea
Bo4g112570
N
0.000
Bo4g112590
Brassica oleracea
Bo4g112590
N
0.000
Bo6g072500
Brassica oleracea
Bo6g072500
N
0.000
Bo6g072510
Brassica oleracea
Bo6g072510
N
0.000
Bo7g039170
Brassica oleracea
Bo7g039170
N
0.000
Bra003260
Brassica rapa
Bra003260
N
0.000
Bra003261
Brassica rapa
Bra003261
N
0.000
ORG2
Arabidopsis thaliana
AT3G56970
N
0.000
Bra014658
Brassica rapa
Bra014658
N
0.000
Bra014971
Brassica rapa
Bra014971
N
0.000
BHLH039
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5001751
N
0.000
POPTR_0006s03560
Populus trichocarpa
POPTR_0006s03560
N
0.000
POPTR_0006s03590
Populus trichocarpa
POPTR_0006s03590
N
0.000
POPTR_0016s03680
Populus trichocarpa
POPTR_0016s03680
N
0.000
PRUPE_ppa018670mg
Prunus persica
PRUPE_ppa018670mg
N
0.000
PRUPE_ppa024966mg
Prunus persica
PRUPE_ppa024966mg
N
0.000