ENSPSIG00000009002 (Pelodiscus sinensis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSPSIG00000009002 T036949_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tfap4
M01717_2.00 		Mus musculus
VHCABVYGB
VCRBVTGDB		 PBM
Weirauch et al.(2014)
pTH5067 		0.914 1.000
TFAP4
M02776_2.00 		Homo sapiens
AWCAGCTGWY
RWCAGCTGWT		 SELEX
Jolma et al.(2013)
TFAP4_1 		0.914 1.000
TFAP4
M02777_2.00 		Homo sapiens
AWCAGCTGWT
AWCAGCTGWT		 SELEX
Jolma et al.(2013)
TFAP4_2 		0.914 1.000
TFAP4
M04066_2.00 		Homo sapiens
VHCAKVTGDB
VHCABMTGDB		 SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_1 		0.914 1.000
TFAP4
M04067_2.00 		Homo sapiens
VWCAGCTGWB
VWCAGCTGWB		 SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_2 		0.914 1.000
TFAP4
M04070_2.00 		Homo sapiens
RHCAYVTGDB
VHCABRTGDY		 SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_1 		0.914 1.000
TFAP4
M04071_2.00 		Homo sapiens
VHCAGCTGDB
VHCAGCTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_2 		0.914 1.000
TFAP4
M08712_2.00 		Homo sapiens
VMNCAGCTGR
YCAGCTGNKB		 Misc
Kulakovskiy et al.(2013)
TFAP4_HUMAN.H11MO.0.A 		0.914 1.000
TFAP4
M09453_2.00 		Homo sapiens
NVHCAGCTGD
HCAGCTGDBN		 Misc
Heinz et al.(2010)
AML-Tfap4_GSE45738 		0.914 1.000
TFAP4
M09802_2.00 		Homo sapiens
MNGNCHVCAGCTGDBBBW
WVVVHCAGCTGBDGNCNK		 Transfac
Matys et al.(2006)
V$AP4_01 		0.914 1.000
TFAP4
M09803_2.00 		Homo sapiens
NNSAGCTGHB
VDCAGCTSNN		 Transfac
Matys et al.(2006)
V$AP4_Q5 		0.914 1.000
TFAP4
M09804_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AP4_Q6_01 		0.914 1.000
TFAP4
M09805_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AP4_Q6_02 		0.914 1.000
TFAP4
M09806_2.00 		Homo sapiens
NVCAGCTGHB
VDCAGCTGBN		 Transfac
Matys et al.(2006)
V$AP4_Q6 		0.914 1.000
TFAP4
M04068_2.00 		Homo sapiens
DHCABMTGDN
NHCAKVTGDH		 SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_1 		0.914 1.000
TFAP4
M04069_2.00 		Homo sapiens
AWCAGCTGWT
AWCAGCTGWT		 SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_2 		0.914 1.000
TFAP4
M04072_2.00 		Homo sapiens
VHCABVTGDB
VHCABVTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_1 		0.914 1.000
TFAP4
M04073_2.00 		Homo sapiens
VHCAGCTGDB
VHCAGCTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_2 		0.914 1.000
crp
M03595_2.00 		Drosophila melanogaster
AACAGCTGWT
AWCAGCTGTT		 SELEX
Nitta et al.(2015)
crp_1 		0.843 0.808
crp
M05937_2.00 		Drosophila melanogaster
VAHCAGCTGAY
RTCAGCTGDWB		 B1H
Zhu et al.(2011)
crp_SANGER_10_FBgn0001994 		0.843 0.808
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPSIP00000009972 bHLH 37 88

Links

Other bHLH family TFs
Other Pelodiscus sinensis TFs

103 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-101 Caenorhabditis elegans WBGene00003691 I 0.000
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.000
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.000
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.000
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.000
NECAME_00872 Necator americanus NECAME_00872 I 0.000
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.000
L893_g25227 Steinernema glaseri L893_g25227 I 0.000
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.000
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.000
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.000
ASU_12501 Ascaris suum ASU_12501 I 0.000
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.000
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.000
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.000
nhr-68 Caenorhabditis elegans WBGene00003658 I 0.000
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.000
CRE26982 Caenorhabditis remanei CRE26982 I 0.000
CRE26981 Caenorhabditis remanei CRE26981 I 0.000
CRE25378 Caenorhabditis remanei CRE25378 I 0.000
CRE09267 Caenorhabditis remanei CRE09267 I 0.000
CJA37776 Caenorhabditis japonica CJA37776 I 0.000
CJA01292 Caenorhabditis japonica CJA01292 I 0.000
CBN30215 Caenorhabditis brenneri CBN30215 I 0.000
CBN20518 Caenorhabditis brenneri CBN20518 I 0.000
CBG23319 Caenorhabditis briggsae CBG23319 I 0.000
CBG23318 Caenorhabditis briggsae CBG23318 I 0.000
CBG16594 Caenorhabditis briggsae CBG16594 I 0.000
CBG01439 Caenorhabditis briggsae CBG01439 N 0.000
nhr-114 Caenorhabditis elegans WBGene00003704 N 0.000
CBN03435 Caenorhabditis brenneri CBN03435 N 0.000