ENSPSIG00000013131 (Pelodiscus sinensis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSPSIG00000013131 T036970_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arntl
M01751_2.00 		Mus musculus
NCACGTGAYN
NRTCACGTGN		 PBM
Weirauch et al.(2014)
pTH5064 		0.914 1.000
ARNTL
M02787_2.00 		Homo sapiens
GTCACGTGAC
GTCACGTGAC		 SELEX
Jolma et al.(2013)
ARNTL_1 		0.914 1.000
ARNTL
M04124_2.00 		Homo sapiens
RDCACGTGHN
NDCACGTGHY		 SELEX
Yin et al.(2017)
ARNTL_eDBD_HT-SELEX 		0.914 1.000
ARNTL
M08725_2.00 		Homo sapiens
NVDCACGTGBN
NVCACGTGHBN		 Misc
Kulakovskiy et al.(2013)
BMAL1_HUMAN.H11MO.0.A 		0.914 1.000
Arntl
M08776_2.00 		Mus musculus
VCACGTGMN
NKCACGTGB		 Misc
Kulakovskiy et al.(2013)
BMAL1_MOUSE.H11MO.0.A 		0.914 1.000
Arntl
M09478_2.00 		Mus musculus
CACGTGNN
NNCACGTG		 Misc
Heinz et al.(2010)
Liver-Bmal1_GSE39860 		0.914 1.000
Arntl
M09889_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_01 		0.914 1.000
ARNTL
M09841_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_Q6 		0.914 1.000
ARNTL
M04125_2.00 		Homo sapiens
NDCACRTGHY
RDCAYGTGHN		 SELEX
Yin et al.(2017)
ARNTL_eDBD_Methyl-HT-SELEX 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPSIP00000014834 bHLH 80 133

Links

Other bHLH family TFs
Other Pelodiscus sinensis TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SGR5 Arabidopsis thaliana AT2G01940 D
AMTR_s00024p00098860 Amborella trichopoda AMTR_s00024p00098860 I
AtIDD16 Arabidopsis thaliana AT1G25250 I
IDD14 Arabidopsis thaliana AT1G68130 I
BGIOSGA011151 Oryza indica BGIOSGA011151 I
BGIOSGA030871 Oryza indica BGIOSGA030871 I
Bo2g134790 Brassica oleracea Bo2g134790 I
Bo3g139880 Brassica oleracea Bo3g139880 I
Bo5g043540 Brassica oleracea Bo5g043540 I
Bo9g070370 Brassica oleracea Bo9g070370 I
Bra010981 Brassica rapa Bra010981 I
Bra017432 Brassica rapa Bra017432 I
Bra024771 Brassica rapa Bra024771 I
Bra024841 Brassica rapa Bra024841 I
Bra026624 Brassica rapa Bra026624 I
BRADI1G68730 Brachypodium distachyon BRADI1G68730 I
BRADI3G37890 Brachypodium distachyon BRADI3G37890 I
BRADI4G31770 Brachypodium distachyon BRADI4G31770 I
F775_43255 Aegilops tauschii F775_43255 I
SGR5 Arabidopsis lyrata fgenesh2_kg.5__108__AT2G01940.1 I
GLYMA05G26780 Glycine max GLYMA05G26780 I
GLYMA05G33590 Glycine max GLYMA05G33590 I
GLYMA07G12170 Glycine max GLYMA07G12170 I
GLYMA08G06130 Glycine max GLYMA08G06130 I
GLYMA08G09760 Glycine max GLYMA08G09760 I
GLYMA09G30030 Glycine max GLYMA09G30030 I
GRMZM2G074032 Zea mays GRMZM2G074032 I
GRMZM2G110107 Zea mays GRMZM2G110107 I
GRMZM2G123094 Zea mays GRMZM2G123094 I
GRMZM2G141031 Zea mays GRMZM2G141031 I
GRMZM2G465595 Zea mays GRMZM2G465595 I
GSMUA_Achr10G29940_001 Musa acuminata GSMUA_Achr10G29940_001 I
GSMUA_Achr5G23130_001 Musa acuminata GSMUA_Achr5G23130_001 I
GSMUA_Achr6G02490_001 Musa acuminata GSMUA_Achr6G02490_001 I
GSMUA_Achr7G18610_001 Musa acuminata GSMUA_Achr7G18610_001 I
LPERR03G08760 Leersia perrieri LPERR03G08760 I
LPERR08G14510 Leersia perrieri LPERR08G14510 I
LPERR09G08790 Leersia perrieri LPERR09G08790 I
MLOC_57613 Hordeum vulgare MLOC_57613 I
OB09G18760 Oryza brachyantha OB09G18760 I
OBART08G17550 Oryza barthii OBART08G17550 I
OBART09G12250 Oryza barthii OBART09G12250 I
OGLUM03G09920 Oryza glumaepatula OGLUM03G09920 I
OGLUM08G18370 Oryza glumaepatula OGLUM08G18370 I
OGLUM09G12720 Oryza glumaepatula OGLUM09G12720 I
OMERI03G09110 Oryza meridionalis OMERI03G09110 I
OMERI08G14120 Oryza meridionalis OMERI08G14120 I
OMERI09G13410 Oryza meridionalis OMERI09G13410 I
ONIVA03G10380 Oryza nivara ONIVA03G10380 I
ONIVA08G19430 Oryza nivara ONIVA08G19430 I
ONIVA09G13010 Oryza nivara ONIVA09G13010 I
OPUNC03G09440 Oryza punctata OPUNC03G09440 I
OPUNC08G15410 Oryza punctata OPUNC08G15410 I
OPUNC09G10740 Oryza punctata OPUNC09G10740 I
ORGLA03G0094200 Oryza glaberrima ORGLA03G0094200 I
ORGLA08G0153600 Oryza glaberrima ORGLA08G0153600 I
ORGLA09G0092400 Oryza glaberrima ORGLA09G0092400 I
ORGLA09G0169200 Oryza glaberrima ORGLA09G0169200 I
ORUFI03G10000 Oryza rufipogon ORUFI03G10000 I
ORUFI09G13180 Oryza rufipogon ORUFI09G13180 I
OS03G0237250 Oryza sativa OS03G0237250 I
OS08G0467100 Oryza sativa OS08G0467100 I
PGSC0003DMG400026959 Solanum tuberosum PGSC0003DMG400026959 I
PGSC0003DMG400031049 Solanum tuberosum PGSC0003DMG400031049 I
POPTR_0008s13980 Populus trichocarpa POPTR_0008s13980 I
POPTR_0010s11160 Populus trichocarpa POPTR_0010s11160 I
POPTR_0012s03730 Populus trichocarpa POPTR_0012s03730 I
POPTR_0015s05180 Populus trichocarpa POPTR_0015s05180 I
PRUPE_ppa004447mg Prunus persica PRUPE_ppa004447mg I
PRUPE_ppa005331mg Prunus persica PRUPE_ppa005331mg I
Sb02g026230 Sorghum bicolor Sb02g026230 I
Sb07g022700 Sorghum bicolor Sb07g022700 I
Si029726m.g Setaria italica Si029726m.g I
Solyc01g005060.2 Solanum lycopersicum Solyc01g005060.2 I
Solyc06g072360.2 Solanum lycopersicum Solyc06g072360.2 I
TCM_011210 Theobroma cacao TCM_011210 I
TCM_039880 Theobroma cacao TCM_039880 I
Traes_4AS_2718699A7 Triticum aestivum Traes_4AS_2718699A7 I
VIT_01s0011g06400 Vitis vinifera VIT_01s0011g06400 I
VIT_17s0000g01870 Vitis vinifera VIT_17s0000g01870 I
Ca_05083 Cicer arietinum Ca_05083 I
Ca_22171 Cicer arietinum Ca_22171 I
Cla018945 Citrullus lanatus Cla018945 I
Pm005926 Prunus mume Pm005926 I
Pm025274 Prunus mume Pm025274 I
28952.m000016 Ricinus communis 28952.m000016 I
cassava18079.valid.m1 Manihot esculenta cassava18079.valid.m1 I
cassava1947.valid.m1 Manihot esculenta cassava1947.valid.m1 I
cassava36596.valid.m1 Manihot esculenta cassava36596.valid.m1 I
Cucsa.112090 Cucumis sativus Cucsa.112090 I
Cucsa.122150 Cucumis sativus Cucsa.122150 I
mgf008235m Mimulus guttatus mgf008235m I
Aquca_002_01252 Aquilegia coerulea Aquca_002_01252 I
Bostr.0556s0022 Boechera stricta Bostr.0556s0022 I
Bostr.15697s0010 Boechera stricta Bostr.15697s0010 I
Cagra.2231s0014 Capsella grandiflora Cagra.2231s0014 I
Cagra.3834s0006 Capsella grandiflora Cagra.3834s0006 I
Carubv10009424m.g Capsella rubella Carubv10009424m.g I
Carubv10017254m.g Capsella rubella Carubv10017254m.g I
Ciclev10015315m.g Citrus clementina Ciclev10015315m.g I
Ciclev10020125m.g Citrus clementina Ciclev10020125m.g I
Eucgr.G02066 Eucalyptus grandis Eucgr.G02066 I
Eucgr.H00574 Eucalyptus grandis Eucgr.H00574 I
Eucgr.K02292 Eucalyptus grandis Eucgr.K02292 I
evm.TU.supercontig_2.118 Carica papaya evm.TU.supercontig_2.118 I
evm.TU.supercontig_7.131 Carica papaya evm.TU.supercontig_7.131 I
gene00618-v1.0-hybrid Fragaria vesca gene00618-v1.0-hybrid I
gene09325-v1.0-hybrid Fragaria vesca gene09325-v1.0-hybrid I
Gorai.002G171100 Gossypium raimondii Gorai.002G171100 I
Gorai.005G134600 Gossypium raimondii Gorai.005G134600 I
Gorai.006G190500 Gossypium raimondii Gorai.006G190500 I
Gorai.007G002600 Gossypium raimondii Gorai.007G002600 I
Gorai.008G169500 Gossypium raimondii Gorai.008G169500 I
Gorai.008G293000 Gossypium raimondii Gorai.008G293000 I
Gorai.009G329200 Gossypium raimondii Gorai.009G329200 I
Lus10026369.g Linum usitatissimum Lus10026369.g I
Lus10031314.g Linum usitatissimum Lus10031314.g I
Lus10031882.g Linum usitatissimum Lus10031882.g I
orange1.1g014184m.g Citrus sinensis orange1.1g014184m.g I
orange1.1g037502m.g Citrus sinensis orange1.1g037502m.g I
Pavir.Ba02057 Panicum virgatum Pavir.Ba02057 I
Pavir.Fa00691 Panicum virgatum Pavir.Fa00691 I
Pavir.Fb01741 Panicum virgatum Pavir.Fb01741 I
Pavir.J12350 Panicum virgatum Pavir.J12350 I
Pavir.J40191 Panicum virgatum Pavir.J40191 I
SapurV1A.0015s0850 Salix purpurea SapurV1A.0015s0850 I
SapurV1A.0055s0020 Salix purpurea SapurV1A.0055s0020 I
SapurV1A.0074s0350 Salix purpurea SapurV1A.0074s0350 I
SapurV1A.1169s0070 Salix purpurea SapurV1A.1169s0070 I
Thhalv10004221m.g Eutrema salsugineum Thhalv10004221m.g I
Thhalv10009376m.g Eutrema salsugineum Thhalv10009376m.g I
PK17145.1 Cannabis sativa PK17145.1 I
PK25720.1 Cannabis sativa PK25720.1 I
chr4.CM0387.280.nc Lotus japonicus chr4.CM0387.280.nc I