bhlhe41 (Takifugu rubripes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTRUG00000005639 T037844_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bhlhe41
M01739_2.00 		Mus musculus
NMNCGTGMN
NKCACGNKN		 PBM
Weirauch et al.(2014)
pTH5060 		0.889 0.944
BHLHE41
M02782_2.00 		Homo sapiens
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB3_1 		0.889 0.944
BHLHE41
M02783_2.00 		Homo sapiens
RKCACGTGAY
RTCACGTGMY		 SELEX
Jolma et al.(2013)
BHLHE41_1 		0.889 0.944
BHLHE41
M04106_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_HT-SELEX 		0.889 0.944
BHLHE41
M09833_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q2 		0.889 0.944
BHLHE41
M09834_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q3 		0.889 0.944
BHLHE41
M04107_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_Methyl-HT-SELEX 		0.889 0.944
Bhlhe40
M00119_2.00 		Mus musculus
DCACGTGMN
NKCACGTGH		 PBM
Badis et al.(2009)
Bhlhb2_1274 		0.889 0.926
Bhlhe40
M01738_2.00 		Mus musculus
NCACRNBN
NVNYGTGN		 PBM
Weirauch et al.(2014)
pTH4330 		0.889 0.926
BHLHE40
M02788_2.00 		Homo sapiens
NKCACGTGMH
DKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB2_1 		0.889 0.926
Bhlhe40
M02817_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_1 		0.889 0.926
Bhlhe40
M02818_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_2 		0.889 0.926
BHLHE40
M04126_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_HT-SELEX 		0.889 0.926
BHLHE40
M07798_2.00 		Homo sapiens
DCACGTGMSN
NSKCACGTGH		 ChIP-seq
Gerstein et al.(2012)
HepG2_BHLHE40_HudsonAlpha 		0.889 0.926
BHLHE40
M08726_2.00 		Homo sapiens
DDCACGTGMS
SKCACGTGHH		 Misc
Kulakovskiy et al.(2013)
BHE40_HUMAN.H11MO.0.A 		0.889 0.926
Bhlhe40
M08761_2.00 		Mus musculus
DCACGTGMS
SKCACGTGH		 Misc
Kulakovskiy et al.(2013)
BHE40_MOUSE.H11MO.0.A 		0.889 0.926
BHLHE40
M09456_2.00 		Homo sapiens
DCACGTGMNN
NNKCACGTGH		 Misc
Heinz et al.(2010)
HepG2-BHLHE40_GSE31477 		0.889 0.926
BHLHE40
M09842_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BHLHE40_03 		0.889 0.926
BHLHE40
M09843_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q2 		0.889 0.926
BHLHE40
M09844_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q3 		0.889 0.926
BHLHE40
M09845_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STRA13_01 		0.889 0.926
BHLHE40
M04127_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_Methyl-HT-SELEX 		0.889 0.926
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000013624 bHLH 47 101
ENSTRUP00000013625 bHLH 47 101

Links

Other bHLH family TFs
Other Takifugu rubripes TFs

118 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.000
PK07533.1 Cannabis sativa PK07533.1 I 0.000
MDP0000205823 Malus domestica MDP0000205823 I 0.000
Lus10040428.g Linum usitatissimum Lus10040428.g I 0.000
Gorai.007G122800 Gossypium raimondii Gorai.007G122800 I 0.000
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.000
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.000
evm.TU.supercontig_18.43 Carica papaya evm.TU.supercontig_18.43 I 0.000
Aquca_022_00003 Aquilegia coerulea Aquca_022_00003 I 0.000
Aquca_003_00556 Aquilegia coerulea Aquca_003_00556 I 0.000
mgf018581m Mimulus guttatus mgf018581m I 0.000
cassava36049.valid.m1 Manihot esculenta cassava36049.valid.m1 I 0.000
cassava23775.valid.m1 Manihot esculenta cassava23775.valid.m1 I 0.000
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.000
ONIVA05G02010 Oryza nivara ONIVA05G02010 I 0.000
BGIOSGA019118 Oryza indica BGIOSGA019118 I 0.000
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.000
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.000
GSMUA_Achr10G12910_001 Musa acuminata GSMUA_Achr10G12910_001 I 0.000
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I 0.000
GSMUA_Achr11G20700_001 Musa acuminata GSMUA_Achr11G20700_001 I 0.000
GSMUA_Achr2G06540_001 Musa acuminata GSMUA_Achr2G06540_001 I 0.000
MTR_1g087040 Medicago truncatula MTR_1g087040 I 0.000
GSMUA_Achr8G29960_001 Musa acuminata GSMUA_Achr8G29960_001 I 0.000
MLOC_52125 Hordeum vulgare MLOC_52125 N 0.000
Pavir.J06041 Panicum virgatum Pavir.J06041 N 0.000
Pavir.Ca00746 Panicum virgatum Pavir.Ca00746 N 0.000
BRADI2G38380 Brachypodium distachyon BRADI2G38380 N 0.000
Aquca_024_00067 Aquilegia coerulea Aquca_024_00067 N 0.000
OMERI05G02170 Oryza meridionalis OMERI05G02170 N 0.000
OB05G12090 Oryza brachyantha OB05G12090 N 0.000
OBART05G02070 Oryza barthii OBART05G02070 N 0.000
Traes_1DS_62FDD3493 Triticum aestivum Traes_1DS_62FDD3493 N 0.000
Traes_1BS_A44C97E0F Triticum aestivum Traes_1BS_A44C97E0F N 0.000
Traes_1AS_94B6230FB1 Triticum aestivum Traes_1AS_94B6230FB1 N 0.000
Si023562m.g Setaria italica Si023562m.g N 0.000
BGIOSGA019116 Oryza indica BGIOSGA019116 N 0.000
ORUFI05G02170 Oryza rufipogon ORUFI05G02170 N 0.000
ORGLA05G0020300 Oryza glaberrima ORGLA05G0020300 N 0.000
OPUNC05G01750 Oryza punctata OPUNC05G01750 N 0.000
OGLUM05G02130 Oryza glumaepatula OGLUM05G02130 N 0.000