CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSXMAG00000012758
(
Xiphophorus maculatus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSXMAG00000012758
T038155_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Mxi1
M08754_2.00
Mus musculus
VCACGTGBSNBBNNV
BNNVVNSVCACGTGB
Misc
Kulakovskiy et al.(2013)
MXI1_MOUSE.H11MO.0.A
0.914
0.923
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSXMAP00000012784
bHLH
112
164
NRSAHNELEKNRRAHLRLCLERLKSLIPLGPDCSRHTTLGLLNKAKVHIKKLE
Links
Other
bHLH
family TFs
Other
Xiphophorus maculatus
TFs
127 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SGR5
Arabidopsis thaliana
AT2G01940
D
ORUFI03G10000
Oryza rufipogon
ORUFI03G10000
I
mgf008235m
Mimulus guttatus
mgf008235m
I
cassava1947.valid.m1
Manihot esculenta
cassava1947.valid.m1
I
Pm005926
Prunus mume
Pm005926
I
Cla005913
Citrullus lanatus
Cla005913
I
Ca_22171
Cicer arietinum
Ca_22171
I
Traes_4AS_2718699A7
Triticum aestivum
Traes_4AS_2718699A7
I
Sb07g022700
Sorghum bicolor
Sb07g022700
I
Sb02g026230
Sorghum bicolor
Sb02g026230
I
PRUPE_ppa005331mg
Prunus persica
PRUPE_ppa005331mg
I
OS08G0467100
Oryza sativa
OS08G0467100
I
OS03G0237250
Oryza sativa
OS03G0237250
I
ORUFI09G13180
Oryza rufipogon
ORUFI09G13180
I
Bostr.15697s0010
Boechera stricta
Bostr.15697s0010
I
ORGLA09G0169200
Oryza glaberrima
ORGLA09G0169200
I
ORGLA09G0092400
Oryza glaberrima
ORGLA09G0092400
I
ORGLA08G0153600
Oryza glaberrima
ORGLA08G0153600
I
ORGLA03G0094200
Oryza glaberrima
ORGLA03G0094200
I
OPUNC09G10740
Oryza punctata
OPUNC09G10740
I
OPUNC08G15410
Oryza punctata
OPUNC08G15410
I
OPUNC03G09440
Oryza punctata
OPUNC03G09440
I
ONIVA09G13010
Oryza nivara
ONIVA09G13010
I
ONIVA08G19430
Oryza nivara
ONIVA08G19430
I
ONIVA03G10380
Oryza nivara
ONIVA03G10380
I
gene00618-v1.0-hybrid
Fragaria vesca
gene00618-v1.0-hybrid
I
chr4.CM0387.280.nc
Lotus japonicus
chr4.CM0387.280.nc
I
PK17145.1
Cannabis sativa
PK17145.1
I
Thhalv10018614m.g
Eutrema salsugineum
Thhalv10018614m.g
I
Thhalv10009376m.g
Eutrema salsugineum
Thhalv10009376m.g
I
Thhalv10004221m.g
Eutrema salsugineum
Thhalv10004221m.g
I
SapurV1A.0074s0350
Salix purpurea
SapurV1A.0074s0350
I
Pavir.J40191
Panicum virgatum
Pavir.J40191
I
Pavir.J12350
Panicum virgatum
Pavir.J12350
I
Pavir.Fb01741
Panicum virgatum
Pavir.Fb01741
I
Pavir.Fa00691
Panicum virgatum
Pavir.Fa00691
I
Pavir.Ba02057
Panicum virgatum
Pavir.Ba02057
I
Bostr.0556s0022
Boechera stricta
Bostr.0556s0022
I
Eucgr.K02292
Eucalyptus grandis
Eucgr.K02292
I
Eucgr.H00574
Eucalyptus grandis
Eucgr.H00574
I
Eucgr.G02066
Eucalyptus grandis
Eucgr.G02066
I
Carubv10020337m.g
Capsella rubella
Carubv10020337m.g
I
Carubv10017254m.g
Capsella rubella
Carubv10017254m.g
I
Carubv10009424m.g
Capsella rubella
Carubv10009424m.g
I
Cagra.3834s0006
Capsella grandiflora
Cagra.3834s0006
I
Cagra.2231s0014
Capsella grandiflora
Cagra.2231s0014
I
Cagra.1111s0006
Capsella grandiflora
Cagra.1111s0006
I
Bostr.26959s0085
Boechera stricta
Bostr.26959s0085
I
OMERI09G13410
Oryza meridionalis
OMERI09G13410
I
Bra004283
Brassica rapa
Bra004283
I
GLYMA05G33590
Glycine max
GLYMA05G33590
I
SGR5
Arabidopsis lyrata
fgenesh2_kg.5__108__AT2G01940.1
I
AtIDD14
Arabidopsis lyrata
fgenesh2_kg.2__1036__AT1G68130.1
I
F775_43255
Aegilops tauschii
F775_43255
I
BRADI4G31770
Brachypodium distachyon
BRADI4G31770
I
BRADI3G37890
Brachypodium distachyon
BRADI3G37890
I
BRADI1G68730
Brachypodium distachyon
BRADI1G68730
I
Bra026624
Brassica rapa
Bra026624
I
Bra024771
Brassica rapa
Bra024771
I
Bra017432
Brassica rapa
Bra017432
I
Bra010981
Brassica rapa
Bra010981
I
GLYMA07G12170
Glycine max
GLYMA07G12170
I
Bra004050
Brassica rapa
Bra004050
I
Bo9g070370
Brassica oleracea
Bo9g070370
I
Bo6g106560
Brassica oleracea
Bo6g106560
I
Bo6g097320
Brassica oleracea
Bo6g097320
I
Bo5g043540
Brassica oleracea
Bo5g043540
I
Bo3g139880
Brassica oleracea
Bo3g139880
I
Bo2g134790
Brassica oleracea
Bo2g134790
I
BGIOSGA030871
Oryza indica
BGIOSGA030871
I
BGIOSGA011151
Oryza indica
BGIOSGA011151
I
IDD14
Arabidopsis thaliana
AT1G68130
I
AtIDD16
Arabidopsis thaliana
AT1G25250
I
LPERR03G08760
Leersia perrieri
LPERR03G08760
I
OMERI08G14120
Oryza meridionalis
OMERI08G14120
I
OMERI03G09110
Oryza meridionalis
OMERI03G09110
I
OGLUM09G12720
Oryza glumaepatula
OGLUM09G12720
I
OGLUM08G18370
Oryza glumaepatula
OGLUM08G18370
I
OGLUM03G09920
Oryza glumaepatula
OGLUM03G09920
I
OBART09G12250
Oryza barthii
OBART09G12250
I
OBART08G17550
Oryza barthii
OBART08G17550
I
OB09G18760
Oryza brachyantha
OB09G18760
I
MLOC_57613
Hordeum vulgare
MLOC_57613
I
LPERR09G08790
Leersia perrieri
LPERR09G08790
I
LPERR08G14510
Leersia perrieri
LPERR08G14510
I
AMTR_s00024p00098860
Amborella trichopoda
AMTR_s00024p00098860
I
GSMUA_Achr7G18610_001
Musa acuminata
GSMUA_Achr7G18610_001
I
GSMUA_Achr6G02490_001
Musa acuminata
GSMUA_Achr6G02490_001
I
GSMUA_Achr5G23130_001
Musa acuminata
GSMUA_Achr5G23130_001
I
GRMZM2G465595
Zea mays
GRMZM2G465595
I
GRMZM2G141031
Zea mays
GRMZM2G141031
I
GRMZM2G123094
Zea mays
GRMZM2G123094
I
GRMZM2G110107
Zea mays
GRMZM2G110107
I
GRMZM2G074032
Zea mays
GRMZM2G074032
I
GLYMA09G30030
Glycine max
GLYMA09G30030
I
GLYMA08G06130
Glycine max
GLYMA08G06130
I