POPTR_0014s09520 (Populus trichocarpa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 POPTR_0014s09520 T043894_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS01G0235700
M09894_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BHLH66_01 		0.914 0.938
PK18474.1
M01127_2.00 		Cannabis sativa
NRCACGTGCN
NGCACGTGYN		 PBM
Lambert et al.(2019)
pTH10273 		0.890 0.958
PK18474.1
M01768_2.00 		Cannabis sativa
NCACGWK
MWCGTGN		 PBM
Weirauch et al.(2014)
pTH9589 		0.890 0.958
MYC2
M01699_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8083 		0.890 0.938
MYC3
M01712_2.00 		Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK		 PBM
Weirauch et al.(2014)
pTH8854 		0.890 0.938
MYC4
M01707_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8260 		0.890 0.917
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.882 0.625
BHLH13
M01698_2.00 		Arabidopsis thaliana
MCACGTGV
BCACGTGK		 PBM
Weirauch et al.(2014)
pTH7565 		0.879 0.938
UNE10
M01705_2.00 		Arabidopsis thaliana
HCACGTGM
KCACGTGD		 PBM
Weirauch et al.(2014)
pTH8112 		0.843 0.500
PK09702.1
M01124_2.00 		Cannabis sativa
GCACGTGV
BCACGTGC		 PBM
Lambert et al.(2019)
pTH11374 		0.840 0.625
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0014s09520.1 bHLH 449 496

Links

Other bHLH family TFs
Other Populus trichocarpa TFs

672 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RUNX2 Homo sapiens ENSG00000124813 D
RUNX1 Homo sapiens ENSG00000159216 D
Runx1 Mus musculus ENSMUSG00000022952 D
Runx2 Mus musculus ENSMUSG00000039153 D
lz Drosophila melanogaster FBgn0002576 D
CpipJ_CPIJ016825 Culex pipiens CpipJ_CPIJ016825 I
AAEL006160 Aedes aegypti AAEL006160 I
AAEL007040 Aedes aegypti AAEL007040 I
ACEP16400 Atta cephalotes ACEP16400 I
ACYPI001442 Acyrthosiphon pisum ACYPI001442 I
ACYPI007541 Acyrthosiphon pisum ACYPI007541 I
CapteG142159 Capitella teleta CapteG142159 I
CGI_10005366 Crassostrea gigas CGI_10005366 I
CPIJ016825 Culex quinquefasciatus CPIJ016825 I
RUNX2 Anolis carolinensis ENSACAG00000013003 I
RUNX3 Anolis carolinensis ENSACAG00000017855 I
ENSAMEG00000005325 Ailuropoda melanoleuca ENSAMEG00000005325 I
ENSAMEG00000009223 Ailuropoda melanoleuca ENSAMEG00000009223 I
ENSAMXG00000000881 Astyanax mexicanus ENSAMXG00000000881 I
ENSAMXG00000017349 Astyanax mexicanus ENSAMXG00000017349 I
ENSAPLG00000007026 Anas platyrhynchos ENSAPLG00000007026 I
ENSAPLG00000011653 Anas platyrhynchos ENSAPLG00000011653 I
RUNX2 Bos taurus ENSBTAG00000004104 I
RUNX1 Bos taurus ENSBTAG00000004742 I
RUNX1 Canis familiaris ENSCAFG00000009596 I
ENSCAFG00000031052 Canis familiaris ENSCAFG00000031052 I
RUNX1 Callithrix jacchus ENSCJAG00000002816 I
ENSCPOG00000002684 Cavia porcellus ENSCPOG00000002684 I
RUNX2 Cavia porcellus ENSCPOG00000005277 I
ENSCSAG00000008703 Chlorocebus sabaeus ENSCSAG00000008703 I
ENSCSAG00000012528 Chlorocebus sabaeus ENSCSAG00000012528 I
runx2a Danio rerio ENSDARG00000040261 I
runx2b Danio rerio ENSDARG00000059233 I
CABZ01102124.1 Danio rerio ENSDARG00000103592 I
RUNX1 Dasypus novemcinctus ENSDNOG00000015041 I
RUNX2 Dasypus novemcinctus ENSDNOG00000034361 I
Runx1 Dipodomys ordii ENSDORG00000004347 I
RUNX1 Equus caballus ENSECAG00000003462 I
RUNX2 Equus caballus ENSECAG00000020875 I
RUNX2 Erinaceus europaeus ENSEEUG00000009243 I
ENSFALG00000000025 Ficedula albicollis ENSFALG00000000025 I
RUNX2 Felis catus ENSFCAG00000022480 I
ENSFCAG00000029032 Felis catus ENSFCAG00000029032 I
RUNX1 Gallus gallus ENSGALG00000016022 I
RUNX1 Gorilla gorilla ENSGGOG00000012862 I
RUNX2 Gorilla gorilla ENSGGOG00000012890 I
ENSLACG00000011545 Latimeria chalumnae ENSLACG00000011545 I
ENSLACG00000015930 Latimeria chalumnae ENSLACG00000015930 I
RUNX1 Loxodonta africana ENSLAFG00000004290 I
RUNX2 Loxodonta africana ENSLAFG00000005054 I
ENSLOCG00000015816 Lepisosteus oculatus ENSLOCG00000015816 I
ENSMGAG00000002035 Meleagris gallopavo ENSMGAG00000002035 I
RUNX2 Meleagris gallopavo ENSMGAG00000014267 I
ENSMGAG00000014534 Meleagris gallopavo ENSMGAG00000014534 I
RUNX1 Microcebus murinus ENSMICG00000011998 I
RUNX2 Myotis lucifugus ENSMLUG00000000514 I
RUNX1 Macaca mulatta ENSMMUG00000001649 I
RUNX3 Macaca mulatta ENSMMUG00000002420 I
RUNX2 Macaca mulatta ENSMMUG00000019819 I
RUNX2 Monodelphis domestica ENSMODG00000018912 I
RUNX1 Monodelphis domestica ENSMODG00000021051 I
ENSMPUG00000001340 Mustela putorius furo ENSMPUG00000001340 I
ENSNLEG00000004310 Nomascus leucogenys ENSNLEG00000004310 I
ENSNLEG00000009021 Nomascus leucogenys ENSNLEG00000009021 I
RUNX2 Ornithorhynchus anatinus ENSOANG00000008265 I
ENSOANG00000031074 Ornithorhynchus anatinus ENSOANG00000031074 I
ENSOCUG00000011739 Oryctolagus cuniculus ENSOCUG00000011739 I
RUNX1 Oryctolagus cuniculus ENSOCUG00000013731 I
RUNX2 Otolemur garnettii ENSOGAG00000003900 I
RUNX1 Otolemur garnettii ENSOGAG00000033362 I
ENSONIG00000004914 Oreochromis niloticus ENSONIG00000004914 I
RUNX2 Ochotona princeps ENSOPRG00000002943 I
ENSPANG00000006186 Papio anubis ENSPANG00000006186 I
ENSPANG00000007357 Papio anubis ENSPANG00000007357 I
ENSPPYG00000011394 Pongo abelii ENSPPYG00000011394 I
ENSPPYG00000016664 Pongo abelii ENSPPYG00000016664 I
ENSPSIG00000014293 Pelodiscus sinensis ENSPSIG00000014293 I
ENSPSIG00000017547 Pelodiscus sinensis ENSPSIG00000017547 I
RUNX1 Pan troglodytes ENSPTRG00000013883 I
RUNX2 Pan troglodytes ENSPTRG00000018228 I
RUNX1 Pteropus vampyrus ENSPVAG00000001606 I
Runx1 Rattus norvegicus ENSRNOG00000001704 I
Runx2 Rattus norvegicus ENSRNOG00000020193 I
ENSSHAG00000009950 Sarcophilus harrisii ENSSHAG00000009950 I
ENSSHAG00000012559 Sarcophilus harrisii ENSSHAG00000012559 I
ENSSHAG00000014782 Sarcophilus harrisii ENSSHAG00000014782 I
ENSSSCG00000012051 Sus scrofa ENSSSCG00000012051 I
ENSSSCG00000025551 Sus scrofa ENSSSCG00000025551 I
ENSSTOG00000010163 Ictidomys tridecemlineatus ENSSTOG00000010163 I
ENSSTOG00000020082 Ictidomys tridecemlineatus ENSSTOG00000020082 I
RUNX2 Tupaia belangeri ENSTBEG00000000948 I
RUNX2 Taeniopygia guttata ENSTGUG00000013249 I
ENSTNIG00000018690 Tetraodon nigroviridis ENSTNIG00000018690 I
ENSTSYG00000005097 Tarsius syrichta ENSTSYG00000005097 I
RUNX2 Tursiops truncatus ENSTTRG00000006943 I
RUNX1 Tursiops truncatus ENSTTRG00000014160 I
GA13742 Drosophila pseudoobscura FBgn0073778 I
GF15967 Drosophila ananassae FBgn0092990 I
GG18309 Drosophila erecta FBgn0110525 I
GG19691 Drosophila erecta FBgn0111893 I
GH17737 Drosophila grimshawi FBgn0125207 I
GI14398 Drosophila mojavensis FBgn0137150 I
GI15484 Drosophila mojavensis FBgn0138233 I
GL15800 Drosophila persimilis FBgn0153404 I
GL16499 Drosophila persimilis FBgn0154103 I
GM22478 Drosophila sechellia FBgn0177348 I
GM23044 Drosophila sechellia FBgn0177912 I
GD16951 Drosophila simulans FBgn0188530 I
GD17495 Drosophila simulans FBgn0189047 I
GJ18742 Drosophila virilis FBgn0205894 I
GJ19245 Drosophila virilis FBgn0206390 I
GK19810 Drosophila willistoni FBgn0221808 I
GK25373 Drosophila willistoni FBgn0227332 I
GE17788 Drosophila yakuba FBgn0235232 I
GE17890 Drosophila yakuba FBgn0235328 I
GA22609 Drosophila pseudoobscura FBgn0244012 I
RunxB Drosophila melanogaster FBgn0259162 I
GB52718 Apis mellifera GB52718 I
GB52721 Apis mellifera GB52721 I
GB52761 Apis mellifera GB52761 I
HMEL009842 Heliconius melpomene HMEL009842 I
HMEL014739 Heliconius melpomene HMEL014739 I
KGM_21065 Danaus plexippus KGM_21065 I
LotgiG96224 Lottia gigantea LotgiG96224 I
MCINX000302 Melitaea cinxia MCINX000302 I
MESCA007078 Megaselia scalaris MESCA007078 I
MESCA007079 Megaselia scalaris MESCA007079 I
NV10998 Nasonia vitripennis NV10998 I
NV11000 Nasonia vitripennis NV11000 I
NV17759 Nasonia vitripennis NV17759 I
NV17793 Nasonia vitripennis NV17793 I
PHUM333300 Pediculus humanus PHUM333300 I
PHUM333320 Pediculus humanus PHUM333320 I
PHUM333340 Pediculus humanus PHUM333340 I
RPRC005391 Rhodnius prolixus RPRC005391 I
SINV13317 Solenopsis invicta SINV13317 I
SINV13345 Solenopsis invicta SINV13345 I
SINV13363 Solenopsis invicta SINV13363 I
SINV13405 Solenopsis invicta SINV13405 I
TC005566 Tribolium castaneum TC005566 I
TC005796 Tribolium castaneum TC005796 I
TC006536 Tribolium castaneum TC006536 I
TC006542 Tribolium castaneum TC006542 I
tetur01g02340 Tetranychus urticae tetur01g02340 I
YQE_12218 Dendroctonus ponderosae YQE_12218 I
Aan_R005895 Calypte anna Aan_R005895 I
Aan_R007315 Calypte anna Aan_R007315 I
Afo_R004888 Aptenodytes forsteri Afo_R004888 I
Afo_R008955 Aptenodytes forsteri Afo_R008955 I
Alligator_sinensis_CCG001676.1 Alligator sinensis Alligator_sinensis_CCG001676.1 I
Alligator_sinensis_CCG010991.1 Alligator sinensis Alligator_sinensis_CCG010991.1 I
Brh_R000794 Buceros rhinoceros Brh_R000794 I
Brh_R001637 Buceros rhinoceros Brh_R001637 I
Cflo_03909--XP_394016.2_APIME Camponotus floridanus Cflo_03909--XP_394016.2_APIME I
Cflo_03911--XP_394014.2_APIME Camponotus floridanus Cflo_03911--XP_394014.2_APIME I
Cflo_03913--XP_394013.3_APIME Camponotus floridanus Cflo_03913--XP_394013.3_APIME I
Cmyd_10020455 Chelonia mydas Cmyd_10020455 I
Cmyd_10021516 Chelonia mydas Cmyd_10021516 I
ENSBTAP00000006227-D1 Bos grunniens ENSBTAP00000006227-D1 I
ENSP00000300305 Macaca fascicularis ENSP00000300305 I
ENSP00000409227-D1 Bos grunniens ENSP00000409227-D1 I
Gfo_R013848 Geospiza fortis Gfo_R013848 I
Hsal_04635--XP_394013.3_APIME Harpegnathos saltator Hsal_04635--XP_394013.3_APIME I
Hsal_12319--XP_394016.2_APIME Harpegnathos saltator Hsal_12319--XP_394016.2_APIME I
Hsal_12322--XP_394014.2_APIME Harpegnathos saltator Hsal_12322--XP_394014.2_APIME I
Myotis_brandtii_RUNX2_10026084 Myotis brandtii Myotis_brandtii_RUNX2_10026084 I
Ogr17914 Ophisaurus gracilis Ogr17914 I
Pvit_01165 Pogona vitticeps Pvit_01165 I
Pvit_04762 Pogona vitticeps Pvit_04762 I
Tal_R011874 Tyto alba Tal_R011874 I
Sakowv30005496m.g Saccoglossus kowalevskii Sakowv30005496m.g I
LCUP002647 Lucilia cuprina LCUP002647 I
LCUP002652 Lucilia cuprina LCUP002652 I
LCUP002656 Lucilia cuprina LCUP002656 I
runx1.L Xenopus laevis XB-GENE-864949 I
XP_002939386 Xenopus tropicalis XP_002939386 I
XP_002939387 Xenopus tropicalis XP_002939387 I
XP_002939388 Xenopus tropicalis XP_002939388 I
AALB007752 Anopheles albimanus AALB007752 I
AATE002063 Anopheles atroparvus AATE002063 I
AMAM011616 Anopheles maculatus AMAM011616 I
AQUA009446 Anopheles quadriannulatus AQUA009446 I
ASTEI07771 Anopheles stephensi ASTEI07771 I
LLOJ002717 Lutzomyia longipalpis LLOJ002717 I
MDOA010744 Musca domestica MDOA010744 I
MDOA013149 Musca domestica MDOA013149 I
PPAI006591 Phlebotomus papatasi PPAI006591 I
LCUP002653 Lucilia cuprina LCUP002653 N