Cagra.5770s0003 (Capsella grandiflora)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cagra.5770s0003 T049310_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.5770s0003.1.p bHLH 68 118

Links

Other bHLH family TFs
Other Capsella grandiflora TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC08G07030 Oryza punctata OPUNC08G07030 N
Pavir.Ib04452 Panicum virgatum Pavir.Ib04452 N
Pavir.Ia00050 Panicum virgatum Pavir.Ia00050 N
Pavir.Ha01929 Panicum virgatum Pavir.Ha01929 N
TRIUR3_06257 Triticum urartu TRIUR3_06257 N
Traes_5DL_8DC4CC983 Triticum aestivum Traes_5DL_8DC4CC983 N
Traes_5BL_B1F704307 Triticum aestivum Traes_5BL_B1F704307 N
Traes_4AL_A0565AC4C Triticum aestivum Traes_4AL_A0565AC4C N
Si034994m.g Setaria italica Si034994m.g N
Sb01g000390 Sorghum bicolor Sb01g000390 N
OS08G0242800 Oryza sativa OS08G0242800 N
ORUFI08G08440 Oryza rufipogon ORUFI08G08440 N
ORGLA08G0064000 Oryza glaberrima ORGLA08G0064000 N
BGIOSGA028267 Oryza indica BGIOSGA028267 N
ONIVA08G08070 Oryza nivara ONIVA08G08070 N
OMERI03G18460 Oryza meridionalis OMERI03G18460 N
OLONG_007958 Oryza longistaminata OLONG_007958 N
OBART08G07320 Oryza barthii OBART08G07320 N
OB08G17050 Oryza brachyantha OB08G17050 N
MLOC_4725 Hordeum vulgare MLOC_4725 N
LPERR08G06520 Leersia perrieri LPERR08G06520 N
GSMUA_Achr4G30300_001 Musa acuminata GSMUA_Achr4G30300_001 N
GSMUA_Achr11G17050_001 Musa acuminata GSMUA_Achr11G17050_001 N
GRMZM2G144196 Zea mays GRMZM2G144196 N
F775_07378 Aegilops tauschii F775_07378 N
BRADI1G00750 Brachypodium distachyon BRADI1G00750 N