CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.B03420
(
Eucalyptus grandis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Eucgr.B03420
T049601_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.B03420.1
bHLH
20
61
DQIADLVSKLQRLIPEIRNRRSDKVSASKVLQETCNYIRSLH
Links
Other
bHLH
family TFs
Other
Eucalyptus grandis
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Eucgr.K02464
Eucalyptus grandis
Eucgr.K02464
N
0.854
Pm006527
Prunus mume
Pm006527
N
0.888
Pm015864
Prunus mume
Pm015864
N
0.849
29736.m002007
Ricinus communis
29736.m002007
N
0.914
30147.m014102
Ricinus communis
30147.m014102
N
0.854
cassava19730.m1
Manihot esculenta
cassava19730.m1
N
0.854
cassava35255.valid.m1
Manihot esculenta
cassava35255.valid.m1
N
0.847
cassava39091.m1
Manihot esculenta
cassava39091.m1
N
0.846
Cucsa.197610
Cucumis sativus
Cucsa.197610
N
0.841
Ciclev10013209m.g
Citrus clementina
Ciclev10013209m.g
N
0.849
Pm006526
Prunus mume
Pm006526
N
0.888
evm.TU.supercontig_14.15
Carica papaya
evm.TU.supercontig_14.15
N
0.849
gene28320-v1.0-hybrid
Fragaria vesca
gene28320-v1.0-hybrid
N
0.849
Gorai.006G021800
Gossypium raimondii
Gorai.006G021800
N
0.849
MDP0000210979
Malus domestica
MDP0000210979
N
0.875
SapurV1A.0366s0010
Salix purpurea
SapurV1A.0366s0010
N
0.854
SapurV1A.0481s0010
Salix purpurea
SapurV1A.0481s0010
N
0.854
SapurV1A.1252s0010
Salix purpurea
SapurV1A.1252s0010
N
0.869
LjSGA_010689.2
Lotus japonicus
LjSGA_010689.2
N
0.869
PGSC0003DMG400006893
Solanum tuberosum
PGSC0003DMG400006893
N
0.879
Bra018117
Brassica rapa
Bra018117
N
0.840
GLYMA04G34080
Glycine max
GLYMA04G34080
N
0.869
GLYMA06G20400
Glycine max
GLYMA06G20400
N
0.869
GLYMA13G05280
Glycine max
GLYMA13G05280
N
0.869
GLYMA19G02510
Glycine max
GLYMA19G02510
N
0.869
MTR_6g011670
Medicago truncatula
MTR_6g011670
N
0.849
MTR_7g010120
Medicago truncatula
MTR_7g010120
N
0.875
PGSC0003DMG400001418
Solanum tuberosum
PGSC0003DMG400001418
N
0.855
AMTR_s00010p00254240
Amborella trichopoda
AMTR_s00010p00254240
N
0.884
POPTR_0012s07130
Populus trichocarpa
POPTR_0012s07130
N
0.854
PRUPE_ppa014004mg
Prunus persica
PRUPE_ppa014004mg
N
0.849
PRUPE_ppa016030mg
Prunus persica
PRUPE_ppa016030mg
N
0.888
Solyc02g067380.2
Solanum lycopersicum
Solyc02g067380.2
N
0.879
Solyc02g087860.2
Solanum lycopersicum
Solyc02g087860.2
N
0.855
TCM_018476
Theobroma cacao
TCM_018476
N
0.849
VIT_14s0108g00420
Vitis vinifera
VIT_14s0108g00420
N
0.892
Ca_18688
Cicer arietinum
Ca_18688
N
0.858