arntl.L (Xenopus laevis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 XB-GENE-17342306 T051777_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arntl
M01751_2.00 		Mus musculus
NCACGTGAYN
NRTCACGTGN		 PBM
Weirauch et al.(2014)
pTH5064 		0.914 1.000
ARNTL
M02787_2.00 		Homo sapiens
GTCACGTGAC
GTCACGTGAC		 SELEX
Jolma et al.(2013)
ARNTL_1 		0.914 1.000
ARNTL
M04124_2.00 		Homo sapiens
RDCACGTGHN
NDCACGTGHY		 SELEX
Yin et al.(2017)
ARNTL_eDBD_HT-SELEX 		0.914 1.000
ARNTL
M08725_2.00 		Homo sapiens
NVDCACGTGBN
NVCACGTGHBN		 Misc
Kulakovskiy et al.(2013)
BMAL1_HUMAN.H11MO.0.A 		0.914 1.000
Arntl
M08776_2.00 		Mus musculus
VCACGTGMN
NKCACGTGB		 Misc
Kulakovskiy et al.(2013)
BMAL1_MOUSE.H11MO.0.A 		0.914 1.000
Arntl
M09478_2.00 		Mus musculus
CACGTGNN
NNCACGTG		 Misc
Heinz et al.(2010)
Liver-Bmal1_GSE39860 		0.914 1.000
Arntl
M09889_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_01 		0.914 1.000
ARNTL
M09841_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_Q6 		0.914 1.000
ARNTL
M04125_2.00 		Homo sapiens
NDCACRTGHY
RDCAYGTGHN		 SELEX
Yin et al.(2017)
ARNTL_eDBD_Methyl-HT-SELEX 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH77551 bHLH 78 131

Links

Other bHLH family TFs
Other Xenopus laevis TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thhalv10019516m.g Eutrema salsugineum Thhalv10019516m.g I 0.000
LjSGA_104570.1 Lotus japonicus LjSGA_104570.1 I 0.000
Thhalv10024162m.g Eutrema salsugineum Thhalv10024162m.g I 0.000
Thhalv10024119m.g Eutrema salsugineum Thhalv10024119m.g I 0.000
Thhalv10023873m.g Eutrema salsugineum Thhalv10023873m.g I 0.000
Thhalv10022373m.g Eutrema salsugineum Thhalv10022373m.g I 0.000
Thhalv10019833m.g Eutrema salsugineum Thhalv10019833m.g I 0.000
Thhalv10019810m.g Eutrema salsugineum Thhalv10019810m.g I 0.000
Thhalv10019751m.g Eutrema salsugineum Thhalv10019751m.g I 0.000
Thhalv10019731m.g Eutrema salsugineum Thhalv10019731m.g I 0.000
Thhalv10019579m.g Eutrema salsugineum Thhalv10019579m.g I 0.000
Cagra.1772s0003 Capsella grandiflora Cagra.1772s0003 I 0.000
Thhalv10019451m.g Eutrema salsugineum Thhalv10019451m.g I 0.000
Thhalv10019449m.g Eutrema salsugineum Thhalv10019449m.g I 0.000
Thhalv10002996m.g Eutrema salsugineum Thhalv10002996m.g I 0.000
Thhalv10002956m.g Eutrema salsugineum Thhalv10002956m.g I 0.000
Thhalv10002789m.g Eutrema salsugineum Thhalv10002789m.g I 0.000
Thhalv10002353m.g Eutrema salsugineum Thhalv10002353m.g I 0.000
Thhalv10002352m.g Eutrema salsugineum Thhalv10002352m.g I 0.000
Thhalv10002350m.g Eutrema salsugineum Thhalv10002350m.g I 0.000
Thhalv10002349m.g Eutrema salsugineum Thhalv10002349m.g I 0.000
Thhalv10002346m.g Eutrema salsugineum Thhalv10002346m.g I 0.000
Carubv10014232m.g Capsella rubella Carubv10014232m.g I 0.000
Thhalv10019667m.g Eutrema salsugineum Thhalv10019667m.g N 0.000
Thhalv10019758m.g Eutrema salsugineum Thhalv10019758m.g N 0.000