Bra040260 (Brassica rapa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bra040260 T057534_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ABF2
M01771_2.00 		Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN		 PBM
Weirauch et al.(2014)
pTH8103 		0.884 0.935
ABF2
M06755_2.00 		Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN		 Dap-seq
OMalley et al.(2016)
ABF2_col_v3a 		0.884 0.935
OS08G0471950
M10047_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TRAB1_Q2 		0.812 0.694
PK18009.1
M01158_2.00 		Cannabis sativa
NNACACGTGN
NCACGTGTNN		 PBM
Lambert et al.(2019)
pTH10272 		0.805 0.758
ABF4
M01056_2.00 		Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7315 		0.805 0.758
ABF4
M01057_2.00 		Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN		 PBM
Sullivan et al.(2014)
pTH7551 		0.805 0.758
ABF4
M09911_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF4_Q2 		0.805 0.758
ABF1
M01772_2.00 		Arabidopsis thaliana
NNMCACGTGNN
NNCACGTGKNN		 PBM
Weirauch et al.(2014)
pTH8837 		0.794 0.677
ABF1
M01773_2.00 		Arabidopsis thaliana
NMCACGTGKN
NMCACGTGKN		 PBM
Weirauch et al.(2014)
pTH8853 		0.794 0.677
ABF1
M02656_2.00 		Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC
GRHCACGTGGCVVVVVVVV		 SELEX
Mathelier et al.(2014)
MA0570.1 		0.794 0.677
ABF1
M09906_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_01 		0.794 0.677
ABF1
M09907_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_02 		0.794 0.677
ABF1
M09908_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_03 		0.794 0.677
ABF3
M01782_2.00 		Arabidopsis thaliana
ACACGTGT
ACACGTGT		 PBM
Weirauch et al.(2014)
pTH7240 		0.788 0.581
ABF3
M09912_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF3_Q2 		0.788 0.581
DPBF3
M01133_2.00 		Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD		 PBM
Lambert et al.(2019)
pTH11531 		0.786 0.581
DPBF3
M01058_2.00 		Arabidopsis thaliana
HBACGTGKM
KMCACGTVD		 PBM
Sullivan et al.(2014)
pTH7219 		0.786 0.581
DPBF3
M01059_2.00 		Arabidopsis thaliana
NNMCACGTVN
NBACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7547 		0.786 0.581
DPBF3
M06777_2.00 		Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA		 Dap-seq
OMalley et al.(2016)
AREB3_colamp_a 		0.786 0.581
DPBF3
M06778_2.00 		Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA		 Dap-seq
OMalley et al.(2016)
AREB3_col_v31 		0.786 0.581
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra040260.1-P bZIP 285 346

Links

Other bZIP family TFs
Other Brassica rapa TFs

366 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TBX21 Homo sapiens ENSG00000073861 D
TBR1 Homo sapiens ENSG00000136535 D
EOMES Homo sapiens ENSG00000163508 D
Tbx21 Mus musculus ENSMUSG00000001444 D
Eomes Mus musculus ENSMUSG00000032446 D
Tbr1 Mus musculus ENSMUSG00000035033 D
SPU_025584 Strongylocentrotus purpuratus SPU_025584 D
A0A075Q982_PATMI Patiria miniata A0A075Q982_PATMI D
CapteG223644 Capitella teleta CapteG223644 I
CGI_10020437 Crassostrea gigas CGI_10020437 I
EOMES Anolis carolinensis ENSACAG00000014201 I
ENSAMEG00000004661 Ailuropoda melanoleuca ENSAMEG00000004661 I
ENSAMEG00000012360 Ailuropoda melanoleuca ENSAMEG00000012360 I
ENSAMEG00000012731 Ailuropoda melanoleuca ENSAMEG00000012731 I
ENSAMXG00000009990 Astyanax mexicanus ENSAMXG00000009990 I
ENSAMXG00000010492 Astyanax mexicanus ENSAMXG00000010492 I
ENSAMXG00000012247 Astyanax mexicanus ENSAMXG00000012247 I
TBX21 Bos taurus ENSBTAG00000014199 I
EOMES Bos taurus ENSBTAG00000016920 I
EOMES Canis familiaris ENSCAFG00000005510 I
TBR1 Canis familiaris ENSCAFG00000009984 I
TBX21 Canis familiaris ENSCAFG00000016705 I
EOMES Callithrix jacchus ENSCJAG00000004263 I
TBR1 Callithrix jacchus ENSCJAG00000005603 I
TBX21 Callithrix jacchus ENSCJAG00000007796 I
EOMES Cavia porcellus ENSCPOG00000004381 I
ENSCPOG00000005881 Cavia porcellus ENSCPOG00000005881 I
TBX21 Cavia porcellus ENSCPOG00000026273 I
ENSCSAG00000002587 Chlorocebus sabaeus ENSCSAG00000002587 I
ENSCSAG00000009676 Chlorocebus sabaeus ENSCSAG00000009676 I
ENSCSAG00000015663 Chlorocebus sabaeus ENSCSAG00000015663 I
tbx21 Danio rerio ENSDARG00000004473 I
tbr1b Danio rerio ENSDARG00000004712 I
eomesa Danio rerio ENSDARG00000006640 I
tbr1a Danio rerio ENSDARG00000076259 I
eomesb Danio rerio ENSDARG00000104243 I
TBR1 Dasypus novemcinctus ENSDNOG00000009816 I
Tbx21 Dipodomys ordii ENSDORG00000013302 I
Eomes Dipodomys ordii ENSDORG00000016346 I
ENSECAG00000002502 Equus caballus ENSECAG00000002502 I
EOMES Equus caballus ENSECAG00000021052 I
EOMES Erinaceus europaeus ENSEEUG00000005958 I
ENSFALG00000004466 Ficedula albicollis ENSFALG00000004466 I
ENSFALG00000009181 Ficedula albicollis ENSFALG00000009181 I
EOMES Felis catus ENSFCAG00000003602 I
TBX21 Felis catus ENSFCAG00000010607 I
TBR1 Felis catus ENSFCAG00000025073 I
eomesa Gasterosteus aculeatus ENSGACG00000003160 I
tbr1b Gasterosteus aculeatus ENSGACG00000005648 I
eomesb Gasterosteus aculeatus ENSGACG00000006345 I
EOMES Gallus gallus ENSGALG00000027247 I
TBX21 Gorilla gorilla ENSGGOG00000002208 I
EOMES Gorilla gorilla ENSGGOG00000008358 I
TBR1 Gorilla gorilla ENSGGOG00000015752 I
ENSGMOG00000002634 Gadus morhua ENSGMOG00000002634 I
ENSGMOG00000003675 Gadus morhua ENSGMOG00000003675 I
ENSGMOG00000014981 Gadus morhua ENSGMOG00000014981 I
ENSLACG00000003893 Latimeria chalumnae ENSLACG00000003893 I
ENSLACG00000016985 Latimeria chalumnae ENSLACG00000016985 I
EOMES Loxodonta africana ENSLAFG00000004142 I
TBR1 Loxodonta africana ENSLAFG00000011541 I
ENSLOCG00000002398 Lepisosteus oculatus ENSLOCG00000002398 I
ENSLOCG00000008583 Lepisosteus oculatus ENSLOCG00000008583 I
ENSLOCG00000013335 Lepisosteus oculatus ENSLOCG00000013335 I
ENSMEUG00000014480 Macropus eugenii ENSMEUG00000014480 I
ENSMICG00000015729 Microcebus murinus ENSMICG00000015729 I
EOMES Myotis lucifugus ENSMLUG00000001462 I
TBR1 Myotis lucifugus ENSMLUG00000006008 I
TBX21 Myotis lucifugus ENSMLUG00000014542 I
ENSMMUG00000001904 Macaca mulatta ENSMMUG00000001904 I
TBX21 Macaca mulatta ENSMMUG00000007098 I
TBR1 Macaca mulatta ENSMMUG00000011911 I
TBR1 Monodelphis domestica ENSMODG00000005353 I
ENSMODG00000012526 Monodelphis domestica ENSMODG00000012526 I
ENSMPUG00000000551 Mustela putorius furo ENSMPUG00000000551 I
ENSMPUG00000011981 Mustela putorius furo ENSMPUG00000011981 I
ENSMPUG00000015272 Mustela putorius furo ENSMPUG00000015272 I
ENSNLEG00000001655 Nomascus leucogenys ENSNLEG00000001655 I
ENSNLEG00000002040 Nomascus leucogenys ENSNLEG00000002040 I
ENSNLEG00000004050 Nomascus leucogenys ENSNLEG00000004050 I
EOMES Ornithorhynchus anatinus ENSOANG00000012619 I
ENSOARG00000006620 Ovis aries ENSOARG00000006620 I
ENSOARG00000008340 Ovis aries ENSOARG00000008340 I
ENSOARG00000014467 Ovis aries ENSOARG00000014467 I
ENSOCUG00000000451 Oryctolagus cuniculus ENSOCUG00000000451 I
TBR1 Oryctolagus cuniculus ENSOCUG00000005884 I
TBX21 Oryctolagus cuniculus ENSOCUG00000012907 I
TBR1 Otolemur garnettii ENSOGAG00000004936 I
TBX21 Otolemur garnettii ENSOGAG00000006160 I
EOMES Otolemur garnettii ENSOGAG00000030966 I
ENSONIG00000007180 Oreochromis niloticus ENSONIG00000007180 I
ENSONIG00000008933 Oreochromis niloticus ENSONIG00000008933 I
ENSONIG00000018223 Oreochromis niloticus ENSONIG00000018223 I
ENSONIG00000019678 Oreochromis niloticus ENSONIG00000019678 I
TBR1 Ochotona princeps ENSOPRG00000005150 I
eomesa Oryzias latipes ENSORLG00000002320 I
eomesb Oryzias latipes ENSORLG00000005393 I
tbr1b Oryzias latipes ENSORLG00000016828 I
ENSPANG00000011539 Papio anubis ENSPANG00000011539 I
ENSPANG00000018688 Papio anubis ENSPANG00000018688 I
EOMES Procavia capensis ENSPCAG00000013650 I
ENSPFOG00000006471 Poecilia formosa ENSPFOG00000006471 I
ENSPFOG00000017461 Poecilia formosa ENSPFOG00000017461 I
ENSPFOG00000017938 Poecilia formosa ENSPFOG00000017938 I
ENSPFOG00000018019 Poecilia formosa ENSPFOG00000018019 I
ENSPMAG00000003985 Petromyzon marinus ENSPMAG00000003985 I
ENSPPYG00000008879 Pongo abelii ENSPPYG00000008879 I
ENSPPYG00000012882 Pongo abelii ENSPPYG00000012882 I
ENSPPYG00000014055 Pongo abelii ENSPPYG00000014055 I
ENSPSIG00000004373 Pelodiscus sinensis ENSPSIG00000004373 I
ENSPSIG00000005360 Pelodiscus sinensis ENSPSIG00000005360 I
TBX21 Pan troglodytes ENSPTRG00000009335 I
TBR1 Pan troglodytes ENSPTRG00000012576 I
EOMES Pan troglodytes ENSPTRG00000014705 I
TBX21 Pteropus vampyrus ENSPVAG00000004921 I
EOMES Pteropus vampyrus ENSPVAG00000009999 I
Tbr1 Rattus norvegicus ENSRNOG00000005049 I
Tbx21 Rattus norvegicus ENSRNOG00000009427 I
ENSSHAG00000016616 Sarcophilus harrisii ENSSHAG00000016616 I
ENSSHAG00000017378 Sarcophilus harrisii ENSSHAG00000017378 I
ENSSHAG00000018315 Sarcophilus harrisii ENSSHAG00000018315 I
ENSSSCG00000011219 Sus scrofa ENSSSCG00000011219 I
TBX21 Sus scrofa ENSSSCG00000017517 I
ENSSSCG00000022626 Sus scrofa ENSSSCG00000022626 I
ENSSTOG00000001626 Ictidomys tridecemlineatus ENSSTOG00000001626 I
ENSSTOG00000020918 Ictidomys tridecemlineatus ENSSTOG00000020918 I
ENSSTOG00000023843 Ictidomys tridecemlineatus ENSSTOG00000023843 I
TBR1 Tupaia belangeri ENSTBEG00000014183 I
tbx21 Tetraodon nigroviridis ENSTNIG00000010103 I
tbr1b Tetraodon nigroviridis ENSTNIG00000016497 I
eomesa Tetraodon nigroviridis ENSTNIG00000017582 I
eomesb Tetraodon nigroviridis ENSTNIG00000019116 I
tbr1b Takifugu rubripes ENSTRUG00000005183 I
eomesa Takifugu rubripes ENSTRUG00000005361 I
eomesb Takifugu rubripes ENSTRUG00000008966 I
tbx21 Takifugu rubripes ENSTRUG00000012995 I
ENSTTRG00000006645 Tursiops truncatus ENSTTRG00000006645 I
ENSVPAG00000002720 Vicugna pacos ENSVPAG00000002720 I
ENSXMAG00000000528 Xiphophorus maculatus ENSXMAG00000000528 I
ENSXMAG00000011427 Xiphophorus maculatus ENSXMAG00000011427 I
ENSXMAG00000013655 Xiphophorus maculatus ENSXMAG00000013655 I
ENSXMAG00000014284 Xiphophorus maculatus ENSXMAG00000014284 I
LotgiG129911 Lottia gigantea LotgiG129911 I
Alligator_sinensis_CCG012002.1 Alligator sinensis Alligator_sinensis_CCG012002.1 I
Alligator_sinensis_CCG014450.1 Alligator sinensis Alligator_sinensis_CCG014450.1 I
Brh_R007719 Buceros rhinoceros Brh_R007719 I
ENSBTAP00000018875-D1 Bos grunniens ENSBTAP00000018875-D1 I
ENSP00000177694 Macaca fascicularis ENSP00000177694 I
ENSP00000374205-D1 Bos grunniens ENSP00000374205-D1 I
ENSP00000374205 Macaca fascicularis ENSP00000374205 I
ENSP00000388620-D1 Bos grunniens ENSP00000388620-D1 I
ENSP00000388620 Macaca fascicularis ENSP00000388620 I
Myotis_brandtii_KPNB1_10030428 Myotis brandtii Myotis_brandtii_KPNB1_10030428 I
Myotis_brandtii_SLC4A10_10035570 Myotis brandtii Myotis_brandtii_SLC4A10_10035570 I
Ogr17175 Ophisaurus gracilis Ogr17175 I
Pvit_15940 Pogona vitticeps Pvit_15940 I
Pvit_16634 Pogona vitticeps Pvit_16634 I
estExt_fgenesh2_kg.C_1840001 Branchiostoma floridae estExt_fgenesh2_kg.C_1840001 I
fgenesh2_pg.scaffold_55000054 Branchiostoma floridae fgenesh2_pg.scaffold_55000054 I
Sakowv30002752m.g Saccoglossus kowalevskii Sakowv30002752m.g I
AAI66068 Xenopus tropicalis AAI66068 I
tbx21 Xenopus tropicalis XB-GENE-479103 I
eomes Xenopus tropicalis XB-GENE-479769 I
eomes.S Xenopus laevis XB-GENE-6487182 I
eomes.L Xenopus laevis XB-GENE-865305 I
tbr1 Xenopus tropicalis XB-GENE-942241 I