CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSFALG00000002102
(
Ficedula albicollis
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSFALG00000002102
T059636_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATF1
M08792_2.00
Homo sapiens
HBRCGTCAYHN
NDRTGACGYVD
Misc
Kulakovskiy et al.(2013)
ATF1_HUMAN.H11MO.0.B
0.906
0.967
ATF1
M09485_2.00
Homo sapiens
NVTGACGTMA
TKACGTCABN
Misc
Heinz et al.(2010)
K562-ATF1_GSE31477
0.906
0.967
ATF1
M09956_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF1_Q3
0.906
0.967
ATF1
M09957_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF1_Q6_01
0.906
0.967
ATF1
M09958_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF1_Q6
0.906
0.967
Atf1
M00124_2.00
Mus musculus
NNNNDNDNNN
NNNHNHNNNN
PBM
Badis et al.(2009)
Atf1_3026
0.896
0.967
Atf1
M01804_2.00
Mus musculus
RTGACGTV
BACGTCAY
PBM
Weirauch et al.(2014)
pTH5005
0.896
0.967
Atf1
M08820_2.00
Mus musculus
VTGACGTSAV
BTSACGTCAB
Misc
Kulakovskiy et al.(2013)
ATF1_MOUSE.H11MO.0.B
0.896
0.967
Creb1
M00992_2.00
Mus musculus
NNTGACGTCV
BGACGTCANN
PBM
Mann et al.(2013)
CREB1_UM_HK
0.894
0.900
Creb1
M01806_2.00
Mus musculus
VTKACGHNN
NNDCGTMAB
PBM
Weirauch et al.(2014)
pTH5080
0.894
0.900
CREB1
M04264_2.00
Homo sapiens
NVTKACGTMABN
NVTKACGTMABN
SELEX
Yin et al.(2017)
CREB1_FL_HT-SELEX
0.894
0.900
CREB1
M04258_2.00
Homo sapiens
NVTKACGTMANN
NNTKACGTMABN
SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_1
0.894
0.900
CREB1
M04259_2.00
Homo sapiens
NRTGACGTR
YACGTCAYN
SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_2
0.894
0.900
CREB1
M04260_2.00
Homo sapiens
VTSACRYGWBAY
RTVWCRYGTSAB
SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_3
0.894
0.900
CREB1
M04022_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Rodriguez-Martinez et al.(2017)
CREB1.1
0.894
0.900
CREB1
M04023_2.00
Homo sapiens
RTGACGTADB
VHTACGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
CREB1.2
0.894
0.900
CREB1
M08066_2.00
Homo sapiens
NVTGACGTCABN
NVTGACGTCABN
ChIP-seq
Mathelier et al.(2014)
MA0018.3
0.894
0.900
CREB1
M08791_2.00
Homo sapiens
WKRCGTCAYYN
NRRTGACGYMW
Misc
Kulakovskiy et al.(2013)
CREB1_HUMAN.H11MO.0.A
0.894
0.900
Creb1
M08824_2.00
Mus musculus
WKRCGTCAYYN
NRRTGACGYMW
Misc
Kulakovskiy et al.(2013)
CREB1_MOUSE.H11MO.0.A
0.894
0.900
CREB1
M09948_2.00
Homo sapiens
TGACGTMW
WKACGTCA
Transfac
Matys et al.(2006)
V$CREB_01
0.894
0.900
CREB1
M09949_2.00
Homo sapiens
BBGDTGACGYVV
BBRCGTCAHCVV
Transfac
Matys et al.(2006)
V$CREB_02
0.894
0.900
CREB1
M09950_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREB1_Q3
0.894
0.900
CREB1
M09951_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREB1_Q6
0.894
0.900
CREB1
M09952_2.00
Homo sapiens
BSTGACGYARNN
NNYTRCGTCASV
Transfac
Matys et al.(2006)
V$CREB_Q2
0.894
0.900
CREB1
M09953_2.00
Homo sapiens
BSTGACGYMRBV
BVYKRCGTCASV
Transfac
Matys et al.(2006)
V$CREB_Q4
0.894
0.900
CREB1
M09954_2.00
Homo sapiens
KKGGGKTGACGYMND
HNKRCGTCAMCCCMM
Transfac
Matys et al.(2006)
V$TAXCREB_01
0.894
0.900
CREB1
M09955_2.00
Homo sapiens
RTGACGCATAYCCCC
GGGGRTATGCGTCAY
Transfac
Matys et al.(2006)
V$TAXCREB_02
0.894
0.900
Creb1
M00991_2.00
Mus musculus
NNRTGACGYVN
NBRCGTCAYNN
PBM
Mann et al.(2013)
CREB1_M_HK
0.894
0.900
CREB1
M04265_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREB1_FL_Methyl-HT-SELEX
0.894
0.900
CREB1
M04261_2.00
Homo sapiens
BRTGAYGYGND
HNCRCRTCAYV
SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_1
0.894
0.900
CREB1
M04262_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_2
0.894
0.900
CREB1
M04263_2.00
Homo sapiens
NRTGACGYV
BRCGTCAYN
SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_3
0.894
0.900
Crem
M01821_2.00
Mus musculus
NRTKACGTMN
NKACGTMAYN
PBM
Weirauch et al.(2014)
pTH5002
0.880
0.883
Crem
M08845_2.00
Mus musculus
SVVTGACGTSA
TSACGTCABBS
Misc
Kulakovskiy et al.(2013)
CREM_MOUSE.H11MO.0.C
0.880
0.883
CREM
M04229_2.00
Homo sapiens
VVTBACGTVABN
NVTBACGTVABB
SELEX
Yin et al.(2017)
CREM_eDBD_HT-SELEX
0.849
0.733
CREM
M08784_2.00
Homo sapiens
SVVTGACGTSA
TSACGTCABBS
Misc
Kulakovskiy et al.(2013)
CREM_HUMAN.H11MO.0.C
0.849
0.733
CREM
M09930_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREM_Q6_01
0.849
0.733
CREM
M09931_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREM_Q6
0.849
0.733
CREM
M04230_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREM_eDBD_Methyl-HT-SELEX
0.849
0.733
CrebB-17A
M03659_2.00
Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY
SELEX
Nitta et al.(2015)
CrebB-17A_1
0.817
0.817
CrebB-17A
M03660_2.00
Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY
SELEX
Nitta et al.(2015)
CrebB-17A_2
0.817
0.817
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFALP00000002189
bZIP
252
311
DPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYCHKS
Links
Other
bZIP
family TFs
Other
Ficedula albicollis
TFs
360 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29838.m001723
Ricinus communis
29838.m001723
N
Ciclev10028671m.g
Citrus clementina
Ciclev10028671m.g
N
Ciclev10001533m.g
Citrus clementina
Ciclev10001533m.g
N
Bostr.15774s0100
Boechera stricta
Bostr.15774s0100
N
Aquca_007_00525
Aquilegia coerulea
Aquca_007_00525
N
mgf001782m
Mimulus guttatus
mgf001782m
N
Cucsa.160520
Cucumis sativus
Cucsa.160520
N
cassava6877.valid.m1
Manihot esculenta
cassava6877.valid.m1
N
cassava2865.m1
Manihot esculenta
cassava2865.m1
N
Eucgr.F00433
Eucalyptus grandis
Eucgr.F00433
N
29596.m000719
Ricinus communis
29596.m000719
N
Pm004389
Prunus mume
Pm004389
N
Cla022485
Citrullus lanatus
Cla022485
N
Ca_01470
Cicer arietinum
Ca_01470
N
VIT_18s0001g07730
Vitis vinifera
VIT_18s0001g07730
N
TRIUR3_23258
Triticum urartu
TRIUR3_23258
N
TRIUR3_15386
Triticum urartu
TRIUR3_15386
N
Traes_4DS_AFCEDDE67
Triticum aestivum
Traes_4DS_AFCEDDE67
N
evm.TU.supercontig_21.35
Carica papaya
evm.TU.supercontig_21.35
N
gene26538-v1.0-hybrid
Fragaria vesca
gene26538-v1.0-hybrid
N
Gorai.002G138300
Gossypium raimondii
Gorai.002G138300
N
Gorai.005G226000
Gossypium raimondii
Gorai.005G226000
N
Gorai.010G033400
Gossypium raimondii
Gorai.010G033400
N
MDP0000192617
Malus domestica
MDP0000192617
N
orange1.1g017195m.g
Citrus sinensis
orange1.1g017195m.g
N
orange1.1g017348m.g
Citrus sinensis
orange1.1g017348m.g
N
Pavir.Ib04266
Panicum virgatum
Pavir.Ib04266
N
Pavir.J38243
Panicum virgatum
Pavir.J38243
N
SapurV1A.0004s0640
Salix purpurea
SapurV1A.0004s0640
N
SapurV1A.0187s0160
Salix purpurea
SapurV1A.0187s0160
N
SapurV1A.1216s0090
Salix purpurea
SapurV1A.1216s0090
N
PK22222.1
Cannabis sativa
PK22222.1
N
LjT45A20.140.nd
Lotus japonicus
LjT45A20.140.nd
N
MLOC_6017
Hordeum vulgare
MLOC_6017
N
ORGLA01G0401200
Oryza glaberrima
ORGLA01G0401200
N
OPUNC03G27170
Oryza punctata
OPUNC03G27170
N
ONIVA03G31130
Oryza nivara
ONIVA03G31130
N
OMERI03G26130
Oryza meridionalis
OMERI03G26130
N
OLONG_006862
Oryza longistaminata
OLONG_006862
N
OGLUM03G30120
Oryza glumaepatula
OGLUM03G30120
N
OBART03G29860
Oryza barthii
OBART03G29860
N
MTR_3g100040
Medicago truncatula
MTR_3g100040
N
ORUFI03G31080
Oryza rufipogon
ORUFI03G31080
N
MLOC_57142
Hordeum vulgare
MLOC_57142
N
LPERR03G24620
Leersia perrieri
LPERR03G24620
N
GLYMA06G10290
Glycine max
GLYMA06G10290
N
GLYMA04G10340
Glycine max
GLYMA04G10340
N
F775_32334
Aegilops tauschii
F775_32334
N
F775_05698
Aegilops tauschii
F775_05698
N
BRADI1G12330
Brachypodium distachyon
BRADI1G12330
N
GATA18
Oryza indica
BGIOSGA010036
N
GATA18
Oryza sativa
OS03G0684000
N
PGSC0003DMG400009353
Solanum tuberosum
PGSC0003DMG400009353
N
PGSC0003DMG400010684
Solanum tuberosum
PGSC0003DMG400010684
N
XM_002302327.1
Populus trichocarpa
POPTR_0002s11140
N
POPTR_0005s19550
Populus trichocarpa
POPTR_0005s19550
N
POPTR_0007s03120
Populus trichocarpa
POPTR_0007s03120
N
POPTR_0017s06970
Populus trichocarpa
POPTR_0017s06970
N
PRUPE_ppa008377mg
Prunus persica
PRUPE_ppa008377mg
N
Sb01g011840
Sorghum bicolor
Sb01g011840
N
Si036492m.g
Setaria italica
Si036492m.g
N
Solyc01g106040.2
Solanum lycopersicum
Solyc01g106040.2
N
TCM_007358
Theobroma cacao
TCM_007358
N
TCM_034531
Theobroma cacao
TCM_034531
N
Traes_4AL_B6992AAA6
Triticum aestivum
Traes_4AL_B6992AAA6
N
Traes_4BS_ACD70539F
Triticum aestivum
Traes_4BS_ACD70539F
N