cassava6877.valid.m1 (Manihot esculenta)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 cassava6877.valid.m1 T196041_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava6877.valid.m1 GATA 209 246

Links

Other GATA family TFs
Other Manihot esculenta TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0007s03120 Populus trichocarpa POPTR_0007s03120 N 0.867
POPTR_0017s06970 Populus trichocarpa POPTR_0017s06970 N 0.867
TCM_007358 Theobroma cacao TCM_007358 N 0.867
Ciclev10028671m.g Citrus clementina Ciclev10028671m.g N 0.867
orange1.1g017195m.g Citrus sinensis orange1.1g017195m.g N 0.867
SapurV1A.1216s0090 Salix purpurea SapurV1A.1216s0090 N 0.867
GLYMA06G10290 Glycine max GLYMA06G10290 N 0.862
XM_002302327.1 Populus trichocarpa POPTR_0002s11140 N 0.862
POPTR_0005s19550 Populus trichocarpa POPTR_0005s19550 N 0.862
PRUPE_ppa008377mg Prunus persica PRUPE_ppa008377mg N 0.862
TCM_034531 Theobroma cacao TCM_034531 N 0.862
VIT_18s0001g07730 Vitis vinifera VIT_18s0001g07730 N 0.862
Cla022485 Citrullus lanatus Cla022485 N 0.862
Pm004389 Prunus mume Pm004389 N 0.862
29596.m000719 Ricinus communis 29596.m000719 N 0.862
29838.m001723 Ricinus communis 29838.m001723 N 0.862
cassava2865.m1 Manihot esculenta cassava2865.m1 N 0.862
Cucsa.160520 Cucumis sativus Cucsa.160520 N 0.862
mgf001782m Mimulus guttatus mgf001782m N 0.862
Ciclev10001533m.g Citrus clementina Ciclev10001533m.g N 0.862
Eucgr.F00433 Eucalyptus grandis Eucgr.F00433 N 0.862
gene26538-v1.0-hybrid Fragaria vesca gene26538-v1.0-hybrid N 0.862
Gorai.002G138300 Gossypium raimondii Gorai.002G138300 N 0.862
Gorai.005G226000 Gossypium raimondii Gorai.005G226000 N 0.862
Gorai.010G033400 Gossypium raimondii Gorai.010G033400 N 0.862
MDP0000192617 Malus domestica MDP0000192617 N 0.862
orange1.1g017348m.g Citrus sinensis orange1.1g017348m.g N 0.862
SapurV1A.0004s0640 Salix purpurea SapurV1A.0004s0640 N 0.862
SapurV1A.0187s0160 Salix purpurea SapurV1A.0187s0160 N 0.862
PK22222.1 Cannabis sativa PK22222.1 N 0.862
GLYMA04G10340 Glycine max GLYMA04G10340 N 0.857
MTR_3g100040 Medicago truncatula MTR_3g100040 N 0.857
Ca_01470 Cicer arietinum Ca_01470 N 0.857
cassava1723.valid.m1 Manihot esculenta cassava1723.valid.m1 N 0.857
Bostr.15774s0100 Boechera stricta Bostr.15774s0100 N 0.857
evm.TU.supercontig_21.35 Carica papaya evm.TU.supercontig_21.35 N 0.857
Aquca_007_00525 Aquilegia coerulea Aquca_007_00525 N 0.851
LjT45A20.140.nd Lotus japonicus LjT45A20.140.nd N 0.851
PGSC0003DMG400010684 Solanum tuberosum PGSC0003DMG400010684 N 0.847
Solyc01g106040.2 Solanum lycopersicum Solyc01g106040.2 N 0.847
PGSC0003DMG400009353 Solanum tuberosum PGSC0003DMG400009353 N 0.837
GATA18 Oryza indica BGIOSGA010036 N 0.831
BRADI1G12330 Brachypodium distachyon BRADI1G12330 N 0.831
LPERR03G24620 Leersia perrieri LPERR03G24620 N 0.831
MLOC_57142 Hordeum vulgare MLOC_57142 N 0.831
MLOC_6017 Hordeum vulgare MLOC_6017 N 0.831
OBART03G29860 Oryza barthii OBART03G29860 N 0.831
OGLUM03G30120 Oryza glumaepatula OGLUM03G30120 N 0.831
OLONG_006862 Oryza longistaminata OLONG_006862 N 0.831
OMERI03G26130 Oryza meridionalis OMERI03G26130 N 0.831
ONIVA03G31130 Oryza nivara ONIVA03G31130 N 0.831
OPUNC03G27170 Oryza punctata OPUNC03G27170 N 0.831
ORGLA01G0401200 Oryza glaberrima ORGLA01G0401200 N 0.831
ORUFI03G31080 Oryza rufipogon ORUFI03G31080 N 0.831
GATA18 Oryza sativa OS03G0684000 N 0.831
Sb01g011840 Sorghum bicolor Sb01g011840 N 0.831
Si036492m.g Setaria italica Si036492m.g N 0.831
Traes_4AL_B6992AAA6 Triticum aestivum Traes_4AL_B6992AAA6 N 0.831
Traes_4BS_ACD70539F Triticum aestivum Traes_4BS_ACD70539F N 0.831
Traes_4DS_AFCEDDE67 Triticum aestivum Traes_4DS_AFCEDDE67 N 0.831
Pavir.Ib04266 Panicum virgatum Pavir.Ib04266 N 0.831
Pavir.J38243 Panicum virgatum Pavir.J38243 N 0.831
F775_05698 Aegilops tauschii F775_05698 N 0.830
TRIUR3_15386 Triticum urartu TRIUR3_15386 N 0.830
F775_32334 Aegilops tauschii F775_32334 N 0.827
TRIUR3_23258 Triticum urartu TRIUR3_23258 N 0.827