PGSC0003DMG400009353 (Solanum tuberosum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 PGSC0003DMG400009353 T194706_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400024206 GATA 218 255
PGSC0003DMT400024207 GATA 218 255
PGSC0003DMT400024208 GATA 218 255

Links

Other GATA family TFs
Other Solanum tuberosum TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LjT45A20.140.nd Lotus japonicus LjT45A20.140.nd N 0.852
Aquca_007_00525 Aquilegia coerulea Aquca_007_00525 N 0.848
GLYMA06G10290 Glycine max GLYMA06G10290 N 0.842
XM_002302327.1 Populus trichocarpa POPTR_0002s11140 N 0.842
POPTR_0005s19550 Populus trichocarpa POPTR_0005s19550 N 0.842
PRUPE_ppa008377mg Prunus persica PRUPE_ppa008377mg N 0.842
TCM_034531 Theobroma cacao TCM_034531 N 0.842
VIT_18s0001g07730 Vitis vinifera VIT_18s0001g07730 N 0.842
Cla022485 Citrullus lanatus Cla022485 N 0.842
Pm004389 Prunus mume Pm004389 N 0.842
29596.m000719 Ricinus communis 29596.m000719 N 0.842
cassava2865.m1 Manihot esculenta cassava2865.m1 N 0.842
Cucsa.160520 Cucumis sativus Cucsa.160520 N 0.842
mgf001782m Mimulus guttatus mgf001782m N 0.842
Ciclev10001533m.g Citrus clementina Ciclev10001533m.g N 0.842
Eucgr.F00433 Eucalyptus grandis Eucgr.F00433 N 0.842
gene26538-v1.0-hybrid Fragaria vesca gene26538-v1.0-hybrid N 0.842
Gorai.002G138300 Gossypium raimondii Gorai.002G138300 N 0.842
Gorai.010G033400 Gossypium raimondii Gorai.010G033400 N 0.842
MDP0000192617 Malus domestica MDP0000192617 N 0.842
orange1.1g017348m.g Citrus sinensis orange1.1g017348m.g N 0.842
SapurV1A.0004s0640 Salix purpurea SapurV1A.0004s0640 N 0.842
PK22222.1 Cannabis sativa PK22222.1 N 0.842
GLYMA04G10340 Glycine max GLYMA04G10340 N 0.837
MTR_3g100040 Medicago truncatula MTR_3g100040 N 0.837
POPTR_0007s03120 Populus trichocarpa POPTR_0007s03120 N 0.837
POPTR_0017s06970 Populus trichocarpa POPTR_0017s06970 N 0.837
TCM_007358 Theobroma cacao TCM_007358 N 0.837
Ca_01470 Cicer arietinum Ca_01470 N 0.837
29838.m001723 Ricinus communis 29838.m001723 N 0.837
cassava1723.valid.m1 Manihot esculenta cassava1723.valid.m1 N 0.837
cassava6877.valid.m1 Manihot esculenta cassava6877.valid.m1 N 0.837
Bostr.15774s0100 Boechera stricta Bostr.15774s0100 N 0.837
Ciclev10028671m.g Citrus clementina Ciclev10028671m.g N 0.837
evm.TU.supercontig_21.35 Carica papaya evm.TU.supercontig_21.35 N 0.837
orange1.1g017195m.g Citrus sinensis orange1.1g017195m.g N 0.837
SapurV1A.0187s0160 Salix purpurea SapurV1A.0187s0160 N 0.837
SapurV1A.1216s0090 Salix purpurea SapurV1A.1216s0090 N 0.837
PGSC0003DMG400010684 Solanum tuberosum PGSC0003DMG400010684 N 0.832
Solyc01g106040.2 Solanum lycopersicum Solyc01g106040.2 N 0.832
Gorai.005G226000 Gossypium raimondii Gorai.005G226000 N 0.832
MLOC_57142 Hordeum vulgare MLOC_57142 N 0.811
Traes_4AL_B6992AAA6 Triticum aestivum Traes_4AL_B6992AAA6 N 0.811
Traes_4BS_ACD70539F Triticum aestivum Traes_4BS_ACD70539F N 0.811
GATA18 Oryza indica BGIOSGA010036 N 0.806
BRADI1G12330 Brachypodium distachyon BRADI1G12330 N 0.806
F775_32334 Aegilops tauschii F775_32334 N 0.806
LPERR03G24620 Leersia perrieri LPERR03G24620 N 0.806
MLOC_6017 Hordeum vulgare MLOC_6017 N 0.806
OBART03G29860 Oryza barthii OBART03G29860 N 0.806
OGLUM03G30120 Oryza glumaepatula OGLUM03G30120 N 0.806
OLONG_006862 Oryza longistaminata OLONG_006862 N 0.806
OMERI03G26130 Oryza meridionalis OMERI03G26130 N 0.806
ONIVA03G31130 Oryza nivara ONIVA03G31130 N 0.806
OPUNC03G27170 Oryza punctata OPUNC03G27170 N 0.806
ORGLA01G0401200 Oryza glaberrima ORGLA01G0401200 N 0.806
ORUFI03G31080 Oryza rufipogon ORUFI03G31080 N 0.806
GATA18 Oryza sativa OS03G0684000 N 0.806
Sb01g011840 Sorghum bicolor Sb01g011840 N 0.806
Si036492m.g Setaria italica Si036492m.g N 0.806
Traes_4DS_AFCEDDE67 Triticum aestivum Traes_4DS_AFCEDDE67 N 0.806
Pavir.Ib04266 Panicum virgatum Pavir.Ib04266 N 0.806
Pavir.J38243 Panicum virgatum Pavir.J38243 N 0.806
F775_05698 Aegilops tauschii F775_05698 N 0.805
TRIUR3_15386 Triticum urartu TRIUR3_15386 N 0.805