CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPSIG00000004101
(
Pelodiscus sinensis
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSPSIG00000004101
T061165_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NFE2L1
M04008_2.00
Homo sapiens
RTGACTCAY
RTGAGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
NFE2L1.1
0.926
0.952
NFE2L1
M08782_2.00
Homo sapiens
NATGAYD
HRTCATN
Misc
Kulakovskiy et al.(2013)
NF2L1_HUMAN.H11MO.0.C
0.926
0.952
Nfe2l1
M08831_2.00
Mus musculus
NATGAYD
HRTCATN
Misc
Kulakovskiy et al.(2013)
NF2L1_MOUSE.H11MO.0.C
0.926
0.952
NFE2L1
M09925_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFE2L1_Q5
0.926
0.952
NFE2L1
M09926_2.00
Homo sapiens
NNNNHWNNATGAC
GTCATNNWDNNNN
Transfac
Matys et al.(2006)
V$TCF11_01
0.926
0.952
NFE2L3
M09923_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NRF3_02
0.853
0.667
Nfe2l2
M08077_2.00
Mus musculus
NRNNRTGACTCAGCA
TGCTGAGTCAYNNYN
ChIP-seq
Mathelier et al.(2014)
MA0150.2
0.842
0.571
Nfe2l2
M08816_2.00
Mus musculus
RTGACTNAGCANDH
DHNTGCTNAGTCAY
Misc
Kulakovskiy et al.(2013)
NF2L2_MOUSE.H11MO.0.A
0.842
0.571
NFE2L2
M08789_2.00
Homo sapiens
RTGACTCAGCANWW
WWNTGCTGAGTCAY
Misc
Kulakovskiy et al.(2013)
NF2L2_HUMAN.H11MO.0.A
0.841
0.603
NFE2L2
M09943_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NRF2_Q3
0.841
0.603
NFE2L2
M09944_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NRF2_Q4_01
0.841
0.603
NFE2L2
M09945_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NRF2_Q4
0.841
0.603
NFE2L2
M09946_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NRF2_Q6
0.841
0.603
NFE2L2
M01142_2.00
Gallus gallus
NNRTKAYNN
NNRTMAYNN
PBM
Lambert et al.(2019)
pTH9845
0.841
0.635
Nfe2l3
M10031_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NRF3_01
0.838
0.619
Nfe2
M08843_2.00
Mus musculus
RTGACTCAGCANDW
WHNTGCTGAGTCAY
Misc
Kulakovskiy et al.(2013)
NFE2_MOUSE.H11MO.0.A
0.822
0.556
NFE2
M02832_2.00
Homo sapiens
VATGACTCATB
VATGAGTCATB
SELEX
Jolma et al.(2013)
NFE2_1
0.819
0.556
NFE2
M04266_2.00
Homo sapiens
VRTGASTCAYB
VRTGASTCAYB
SELEX
Yin et al.(2017)
NFE2_eDBD_HT-SELEX
0.819
0.556
NFE2
M04024_2.00
Homo sapiens
RTGACTCAY
RTGAGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
NFE2.1
0.819
0.556
NFE2
M07813_2.00
Homo sapiens
VRTGACTCAGCANWWHB
VDWWNTGCTGAGTCAYB
ChIP-seq
Gerstein et al.(2012)
K562_NFE2_Stanford
0.819
0.556
NFE2
M08793_2.00
Homo sapiens
VVRTGACTCAGCA
TGCTGAGTCAYBB
Misc
Kulakovskiy et al.(2013)
NFE2_HUMAN.H11MO.0.A
0.819
0.556
NFE2
M09486_2.00
Homo sapiens
VATGACTCAGCA
TGCTGAGTCATB
Misc
Heinz et al.(2010)
K562-NFE2_GSE31477
0.819
0.556
NFE2
M09959_2.00
Homo sapiens
RTGASTCAGCD
HGCTGASTCAY
Transfac
Matys et al.(2006)
V$NFE2_01
0.819
0.556
NFE2
M09960_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFE2_04
0.819
0.556
NFE2
M09961_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFE2_Q6
0.819
0.556
NFE2
M04267_2.00
Homo sapiens
NRTGASTCAYN
NRTGASTCAYN
SELEX
Yin et al.(2017)
NFE2_eDBD_Methyl-HT-SELEX
0.819
0.556
FBgn0262975
M03654_2.00
Drosophila melanogaster
NYGTCAYSRTGACRN
NYGTCAYSRTGACRN
SELEX
Nitta et al.(2015)
cnc_1
0.797
0.508
FBgn0262975
M03655_2.00
Drosophila melanogaster
SATGACRNVVATGACD
HGTCATBBNYGTCATS
SELEX
Nitta et al.(2015)
cnc_2
0.797
0.508
FBgn0262975
M03656_2.00
Drosophila melanogaster
GTCAKSATGACGTCAY
RTGACGTCATSMTGAC
SELEX
Nitta et al.(2015)
cnc_3
0.797
0.508
FBgn0262975
M08189_2.00
Drosophila melanogaster
TGAYTBDGCA
TGCHVARTCA
ChIP-seq
Contrino et al.(2012)
Mf3
0.797
0.508
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPSIP00000004357
bZIP
192
254
SLIRDIRRRGKNKMAAQNCRKRKLDTILNLERDVEDLQRDKSKLLREKVEFLKSLRQMKQKVQ
Links
Other
bZIP
family TFs
Other
Pelodiscus sinensis
TFs
322 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.009G251800
Gossypium raimondii
Gorai.009G251800
N
0.000
TRAES3BF021600230CFD_g
Triticum aestivum
TRAES3BF021600230CFD_g
N
0.000
Traes_3DL_BF7D83705
Triticum aestivum
Traes_3DL_BF7D83705
N
0.000
TRIUR3_26381
Triticum urartu
TRIUR3_26381
N
0.000
VIT_04s0044g01370
Vitis vinifera
VIT_04s0044g01370
N
0.000
Pm022704
Prunus mume
Pm022704
N
0.000
cassava26784.m1
Manihot esculenta
cassava26784.m1
N
0.000
Aquca_014_00370
Aquilegia coerulea
Aquca_014_00370
N
0.000
Ciclev10000671m.g
Citrus clementina
Ciclev10000671m.g
N
0.000
evm.TU.supercontig_26.96
Carica papaya
evm.TU.supercontig_26.96
N
0.000
gene01015-v1.0-hybrid
Fragaria vesca
gene01015-v1.0-hybrid
N
0.000
Gorai.005G083700
Gossypium raimondii
Gorai.005G083700
N
0.000
Traes_3AL_6E16C8167
Triticum aestivum
Traes_3AL_6E16C8167
N
0.000
MDP0000727836
Malus domestica
MDP0000727836
N
0.000
MDP0000859087
Malus domestica
MDP0000859087
N
0.000
orange1.1g007853m.g
Citrus sinensis
orange1.1g007853m.g
N
0.000
Pavir.Ea03635
Panicum virgatum
Pavir.Ea03635
N
0.000
Pavir.J01797
Panicum virgatum
Pavir.J01797
N
0.000
Pavir.J20385
Panicum virgatum
Pavir.J20385
N
0.000
Pavir.J36240
Panicum virgatum
Pavir.J36240
N
0.000
PK29476.1
Cannabis sativa
PK29476.1
N
0.000
chr1.CM0982.460.nd
Lotus japonicus
chr1.CM0982.460.nd
N
0.000
PDK_20s1392371g003
Phoenix dactylifera
PDK_20s1392371g003
N
0.000
ONIVA01G44280
Oryza nivara
ONIVA01G44280
N
0.000
F775_25916
Aegilops tauschii
F775_25916
N
0.000
GRMZM2G153333
Zea mays
GRMZM2G153333
N
0.000
GSMUA_Achr10G17290_001
Musa acuminata
GSMUA_Achr10G17290_001
N
0.000
GSMUA_Achr3G02410_001
Musa acuminata
GSMUA_Achr3G02410_001
N
0.000
LPERR01G33950
Leersia perrieri
LPERR01G33950
N
0.000
MLOC_6971
Hordeum vulgare
MLOC_6971
N
0.000
MTR_1g029420
Medicago truncatula
MTR_1g029420
N
0.000
OBART01G39420
Oryza barthii
OBART01G39420
N
0.000
OGLUM01G43650
Oryza glumaepatula
OGLUM01G43650
N
0.000
OLONG_003002
Oryza longistaminata
OLONG_003002
N
0.000
OMERI01G36330
Oryza meridionalis
OMERI01G36330
N
0.000
BRADI2G56910
Brachypodium distachyon
BRADI2G56910
N
0.000
OPUNC01G38160
Oryza punctata
OPUNC01G38160
N
0.000
ORGLA01G0333300
Oryza glaberrima
ORGLA01G0333300
N
0.000
ORUFI01G42800
Oryza rufipogon
ORUFI01G42800
N
0.000
OS01G0881500
Oryza sativa
OS01G0881500
N
0.000
PRUPE_ppa003310mg
Prunus persica
PRUPE_ppa003310mg
N
0.000
Sb03g041760
Sorghum bicolor
Sb03g041760
N
0.000
Sb09g020850
Sorghum bicolor
Sb09g020850
N
0.000
Si000832m.g
Setaria italica
Si000832m.g
N
0.000
Si021635m.g
Setaria italica
Si021635m.g
N
0.000
TCM_035362
Theobroma cacao
TCM_035362
N
0.000