CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KGM_21614
(
Danaus plexippus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
KGM_21614
T063916_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HLF
M02831_2.00
Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN
SELEX
Jolma et al.(2013)
HLF_1
0.832
0.730
Hlf
M02860_2.00
Mus musculus
KRTTACGTAAYN
NRTTACGTAAYM
SELEX
Jolma et al.(2013)
Hlf_1
0.832
0.730
HLF
M04245_2.00
Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX
0.832
0.730
HLF
M04016_2.00
Homo sapiens
RTKAYRTAAB
VTTAYRTMAY
SELEX
Rodriguez-Martinez et al.(2017)
HLF.1
0.832
0.730
HLF
M08786_2.00
Homo sapiens
NRTTRYGTAAYMS
SKRTTACRYAAYN
Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C
0.832
0.730
Hlf
M08815_2.00
Mus musculus
VTTRTGYAABH
DVTTRCAYAAB
Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C
0.832
0.730
HLF
M09937_2.00
Homo sapiens
ATKRYGTAAY
RTTACRYMAT
Transfac
Matys et al.(2006)
V$HLF_01
0.832
0.730
HLF
M04246_2.00
Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX
0.832
0.730
Pdp1
M03645_2.00
Drosophila melanogaster
VTTACGTAAB
VTTACGTAAB
SELEX
Nitta et al.(2015)
Pdp1_1
0.830
0.794
Pdp1
M03646_2.00
Drosophila melanogaster
RTTACGTAAY
RTTACGTAAY
SELEX
Nitta et al.(2015)
Pdp1_2
0.830
0.794
Tef
M01803_2.00
Mus musculus
NVTTRYVNNN
NNNBRYAABN
PBM
Weirauch et al.(2014)
pTH5078
0.784
0.635
TEF
M02849_2.00
Homo sapiens
NRTTAYGTAAYN
NRTTACRTAAYN
SELEX
Jolma et al.(2013)
TEF_1
0.784
0.635
TEF
M02850_2.00
Homo sapiens
NVTTAYGTAABN
NVTTACRTAABN
SELEX
Jolma et al.(2013)
TEF_2
0.784
0.635
TEF
M04325_2.00
Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_HT-SELEX
0.784
0.635
TEF
M09983_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_05
0.784
0.635
TEF
M09984_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_06
0.784
0.635
TEF
M09985_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_Q6
0.784
0.635
TEF
M09986_2.00
Homo sapiens
MTKAYGTAAY
RTTACRTMAK
Transfac
Matys et al.(2006)
V$VBP_01
0.784
0.635
TEF
M04326_2.00
Homo sapiens
NRTTACRTAAYN
NRTTAYGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_Methyl-HT-SELEX
0.784
0.635
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EHJ64598
bZIP
219
282
KDDKYWARRRKNNMAAKRSRDARRMKENQIALRAGYLEKENMGLRQEVELLKKENHILREKLSK
Links
Other
bZIP
family TFs
Other
Danaus plexippus
TFs
202 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10043263.g
Linum usitatissimum
Lus10043263.g
N
0.000
cassava13512.valid.m1
Manihot esculenta
cassava13512.valid.m1
N
0.000
cassava13513.valid.m1
Manihot esculenta
cassava13513.valid.m1
N
0.000
Cucsa.132180
Cucumis sativus
Cucsa.132180
N
0.000
Aquca_020_00103
Aquilegia coerulea
Aquca_020_00103
N
0.000
gene31058-v1.0-hybrid
Fragaria vesca
gene31058-v1.0-hybrid
N
0.000
Gorai.011G083900
Gossypium raimondii
Gorai.011G083900
N
0.000
Lus10002168.g
Linum usitatissimum
Lus10002168.g
N
0.000
Lus10030108.g
Linum usitatissimum
Lus10030108.g
N
0.000
Pm027560
Prunus mume
Pm027560
N
0.000
MDP0000152128
Malus domestica
MDP0000152128
N
0.000
MDP0000375866
Malus domestica
MDP0000375866
N
0.000
MDP0000574053
Malus domestica
MDP0000574053
N
0.000
orange1.1g022412m.g
Citrus sinensis
orange1.1g022412m.g
N
0.000
SapurV1A.0034s0480
Salix purpurea
SapurV1A.0034s0480
N
0.000
SapurV1A.1100s0070
Salix purpurea
SapurV1A.1100s0070
N
0.000
PK04144.1
Cannabis sativa
PK04144.1
N
0.000
chr4.CM0234.40.nc
Lotus japonicus
chr4.CM0234.40.nc
N
0.000
PRUPE_ppa008789mg
Prunus persica
PRUPE_ppa008789mg
N
0.000
GLYMA04G23780
Glycine max
GLYMA04G23780
N
0.000
GLYMA04G23980
Glycine max
GLYMA04G23980
N
0.000
GLYMA06G25310
Glycine max
GLYMA06G25310
N
0.000
GLYMA06G30350
Glycine max
GLYMA06G30350
N
0.000
GLYMA06G30590
Glycine max
GLYMA06G30590
N
0.000
GLYMA13G44230
Glycine max
GLYMA13G44230
N
0.000
GLYMA15G01040
Glycine max
GLYMA15G01040
N
0.000
PGSC0003DMG400002913
Solanum tuberosum
PGSC0003DMG400002913
N
0.000
AMTR_s00004p00169140
Amborella trichopoda
AMTR_s00004p00169140
N
0.000
Solyc12g009590.1
Solanum lycopersicum
Solyc12g009590.1
N
0.000
TCM_027169
Theobroma cacao
TCM_027169
N
0.000
VIT_11s0016g05580
Vitis vinifera
VIT_11s0016g05580
N
0.000
Ca_06682
Cicer arietinum
Ca_06682
N
0.000
Ca_19192
Cicer arietinum
Ca_19192
N
0.000
Cla012920
Citrullus lanatus
Cla012920
N
0.000
Cla016961
Citrullus lanatus
Cla016961
N
0.000