TCM_033824 (Theobroma cacao)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 TCM_033824 T068449_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK18009.1
M01158_2.00 		Cannabis sativa
NNACACGTGN
NCACGTGTNN		 PBM
Lambert et al.(2019)
pTH10272 		0.845 0.790
ABF4
M01056_2.00 		Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7315 		0.845 0.758
ABF4
M01057_2.00 		Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN		 PBM
Sullivan et al.(2014)
pTH7551 		0.845 0.758
ABF4
M09911_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF4_Q2 		0.845 0.758
ABF2
M01771_2.00 		Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN		 PBM
Weirauch et al.(2014)
pTH8103 		0.825 0.806
ABF2
M06755_2.00 		Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN		 Dap-seq
OMalley et al.(2016)
ABF2_col_v3a 		0.825 0.806
OS08G0471950
M10047_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TRAB1_Q2 		0.811 0.677
ABF1
M01772_2.00 		Arabidopsis thaliana
NNMCACGTGNN
NNCACGTGKNN		 PBM
Weirauch et al.(2014)
pTH8837 		0.802 0.661
ABF1
M01773_2.00 		Arabidopsis thaliana
NMCACGTGKN
NMCACGTGKN		 PBM
Weirauch et al.(2014)
pTH8853 		0.802 0.661
ABF1
M02656_2.00 		Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC
GRHCACGTGGCVVVVVVVV		 SELEX
Mathelier et al.(2014)
MA0570.1 		0.802 0.661
ABF1
M09906_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_01 		0.802 0.661
ABF1
M09907_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_02 		0.802 0.661
ABF1
M09908_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_03 		0.802 0.661
ABF3
M01782_2.00 		Arabidopsis thaliana
ACACGTGT
ACACGTGT		 PBM
Weirauch et al.(2014)
pTH7240 		0.798 0.613
ABF3
M09912_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF3_Q2 		0.798 0.613
DPBF3
M01133_2.00 		Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD		 PBM
Lambert et al.(2019)
pTH11531 		0.789 0.597
DPBF3
M01058_2.00 		Arabidopsis thaliana
HBACGTGKM
KMCACGTVD		 PBM
Sullivan et al.(2014)
pTH7219 		0.789 0.597
DPBF3
M01059_2.00 		Arabidopsis thaliana
NNMCACGTVN
NBACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7547 		0.789 0.597
DPBF3
M06777_2.00 		Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA		 Dap-seq
OMalley et al.(2016)
AREB3_colamp_a 		0.789 0.597
DPBF3
M06778_2.00 		Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA		 Dap-seq
OMalley et al.(2016)
AREB3_col_v31 		0.789 0.597
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY14438 bZIP 356 417
EOY14439 bZIP 356 417

Links

Other bZIP family TFs
Other Theobroma cacao TFs

376 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LRL2 Arabidopsis thaliana AT4G30980 D
e_gw1.209.40.1 Physcomitrella patens e_gw1.209.40.1 D
AMTR_s00065p00184910 Amborella trichopoda AMTR_s00065p00184910 I
BHLH66 Arabidopsis thaliana AT2G24260 I
BHLH82 Arabidopsis thaliana AT5G58010 I
BGIOSGA013729 Oryza indica BGIOSGA013729 I
BGIOSGA021777 Oryza indica BGIOSGA021777 I
BGIOSGA025266 Oryza indica BGIOSGA025266 I
BGIOSGA029759 Oryza indica BGIOSGA029759 I
Bo1g011740 Brassica oleracea Bo1g011740 I
Bo2g028920 Brassica oleracea Bo2g028920 I
Bo3g018990 Brassica oleracea Bo3g018990 I
Bo4g154370 Brassica oleracea Bo4g154370 I
Bo8g099910 Brassica oleracea Bo8g099910 I
Bo9g133640 Brassica oleracea Bo9g133640 I
Bra002679 Brassica rapa Bra002679 I
Bra006788 Brassica rapa Bra006788 I
Bra007863 Brassica rapa Bra007863 I
Bra011237 Brassica rapa Bra011237 I
Bra020398 Brassica rapa Bra020398 I
Bra032111 Brassica rapa Bra032111 I
BRADI1G05430 Brachypodium distachyon BRADI1G05430 I
BRADI1G47350 Brachypodium distachyon BRADI1G47350 I
BRADI1G55427 Brachypodium distachyon BRADI1G55427 I
F775_30957 Aegilops tauschii F775_30957 I
LRL3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001435 I
LRL1 Arabidopsis lyrata fgenesh2_kg.4__341__AT2G24260.1 I
LRL2 Arabidopsis lyrata fgenesh2_kg.7__1084__AT4G30980.1 I
GLYMA02G36380 Glycine max GLYMA02G36380 I
GLYMA09G14380 Glycine max GLYMA09G14380 I
GLYMA15G33020 Glycine max GLYMA15G33020 I
GLYMA17G08300 Glycine max GLYMA17G08300 I
GRMZM2G004356 Zea mays GRMZM2G004356 I
GRMZM2G027563 Zea mays GRMZM2G027563 I
GRMZM2G067654 Zea mays GRMZM2G067654 I
GRMZM2G162382 Zea mays GRMZM2G162382 I
GRMZM2G350165 Zea mays GRMZM2G350165 I
GSMUA_Achr10G24090_001 Musa acuminata GSMUA_Achr10G24090_001 I
GSMUA_Achr10G30710_001 Musa acuminata GSMUA_Achr10G30710_001 I
GSMUA_Achr4G01910_001 Musa acuminata GSMUA_Achr4G01910_001 I
GSMUA_Achr4G21070_001 Musa acuminata GSMUA_Achr4G21070_001 I
GSMUA_Achr5G03100_001 Musa acuminata GSMUA_Achr5G03100_001 I
GSMUA_Achr5G16470_001 Musa acuminata GSMUA_Achr5G16470_001 I
GSMUA_Achr9G25560_001 Musa acuminata GSMUA_Achr9G25560_001 I
LPERR02G29460 Leersia perrieri LPERR02G29460 I
LPERR03G31640 Leersia perrieri LPERR03G31640 I
LPERR07G04600 Leersia perrieri LPERR07G04600 I
LPERR09G07210 Leersia perrieri LPERR09G07210 I
MLOC_13438 Hordeum vulgare MLOC_13438 I
MLOC_38567 Hordeum vulgare MLOC_38567 I
MTR_4g131160 Medicago truncatula MTR_4g131160 I
OB06G14990 Oryza brachyantha OB06G14990 I
OB07G13990 Oryza brachyantha OB07G13990 I
OBART03G37400 Oryza barthii OBART03G37400 I
OBART06G05420 Oryza barthii OBART06G05420 I
OBART07G05280 Oryza barthii OBART07G05280 I
OGLUM02G37030 Oryza glumaepatula OGLUM02G37030 I
OGLUM03G37150 Oryza glumaepatula OGLUM03G37150 I
OGLUM06G05610 Oryza glumaepatula OGLUM06G05610 I
OGLUM07G04790 Oryza glumaepatula OGLUM07G04790 I
OGLUM09G10750 Oryza glumaepatula OGLUM09G10750 I
OLONG_014165 Oryza longistaminata OLONG_014165 I
OMERI02G33790 Oryza meridionalis OMERI02G33790 I
OMERI03G34570 Oryza meridionalis OMERI03G34570 I
OMERI05G15760 Oryza meridionalis OMERI05G15760 I
ONIVA02G37880 Oryza nivara ONIVA02G37880 I
ONIVA03G38760 Oryza nivara ONIVA03G38760 I
ONIVA06G06250 Oryza nivara ONIVA06G06250 I
ONIVA07G04020 Oryza nivara ONIVA07G04020 I
ONIVA09G10010 Oryza nivara ONIVA09G10010 I
OPUNC03G34510 Oryza punctata OPUNC03G34510 I
OPUNC07G05040 Oryza punctata OPUNC07G05040 I
ORGLA02G0311000 Oryza glaberrima ORGLA02G0311000 I
ORGLA06G0244900 Oryza glaberrima ORGLA06G0244900 I
ORGLA07G0044500 Oryza glaberrima ORGLA07G0044500 I
ORUFI02G37320 Oryza rufipogon ORUFI02G37320 I
ORUFI06G05560 Oryza rufipogon ORUFI06G05560 I
ORUFI07G05060 Oryza rufipogon ORUFI07G05060 I
OS03G0797600 Oryza sativa OS03G0797600 I
OS06G0184000 Oryza sativa OS06G0184000 I
PGSC0003DMG400007827 Solanum tuberosum PGSC0003DMG400007827 I
PGSC0003DMG400011133 Solanum tuberosum PGSC0003DMG400011133 I
POPTR_0018s11800 Populus trichocarpa POPTR_0018s11800 I
PRUPE_ppa005254mg Prunus persica PRUPE_ppa005254mg I
Sb01g005130 Sorghum bicolor Sb01g005130 I
Sb02g004570 Sorghum bicolor Sb02g004570 I
Sb02g024750 Sorghum bicolor Sb02g024750 I
Sb04g035890 Sorghum bicolor Sb04g035890 I
Sb10g005650 Sorghum bicolor Sb10g005650 I
SELMODRAFT_24890 Selaginella moellendorffii SELMODRAFT_24890 I
SELMODRAFT_24892 Selaginella moellendorffii SELMODRAFT_24892 I
SELMODRAFT_422025 Selaginella moellendorffii SELMODRAFT_422025 I
SELMODRAFT_444782 Selaginella moellendorffii SELMODRAFT_444782 I
Si017553m.g Setaria italica Si017553m.g I
Si029708m.g Setaria italica Si029708m.g I
Si030704m.g Setaria italica Si030704m.g I
Si036929m.g Setaria italica Si036929m.g I
Solyc07g005400.2 Solanum lycopersicum Solyc07g005400.2 I
Solyc12g010170.1 Solanum lycopersicum Solyc12g010170.1 I
TCM_037077 Theobroma cacao TCM_037077 I
Traes_5BL_DB5410008 Triticum aestivum Traes_5BL_DB5410008 I
Traes_5DL_1CD573458 Triticum aestivum Traes_5DL_1CD573458 I
Traes_6AL_FD6EC5EA9 Triticum aestivum Traes_6AL_FD6EC5EA9 I
TRIUR3_33768 Triticum urartu TRIUR3_33768 I
VIT_11s0037g00040 Vitis vinifera VIT_11s0037g00040 I
Ca_03340 Cicer arietinum Ca_03340 I
Cla013823 Citrullus lanatus Cla013823 I
Cla019007 Citrullus lanatus Cla019007 I
Pm027715 Prunus mume Pm027715 I
29737.m001209 Ricinus communis 29737.m001209 I
cassava22164.valid.m1 Manihot esculenta cassava22164.valid.m1 I
cassava22165.valid.m1 Manihot esculenta cassava22165.valid.m1 I
Cucsa.132830 Cucumis sativus Cucsa.132830 I
Cucsa.350940 Cucumis sativus Cucsa.350940 I
e_gw1.173.38.1 Physcomitrella patens e_gw1.173.38.1 I
mgf001459m Mimulus guttatus mgf001459m I
mgf009435m Mimulus guttatus mgf009435m I
mgf014585m Mimulus guttatus mgf014585m I
Aquca_016_00200 Aquilegia coerulea Aquca_016_00200 I
Bostr.26833s0448 Boechera stricta Bostr.26833s0448 I
Bostr.27895s0056 Boechera stricta Bostr.27895s0056 I
Bostr.7867s0954 Boechera stricta Bostr.7867s0954 I
Cagra.0380s0028 Capsella grandiflora Cagra.0380s0028 I
Cagra.2848s0086 Capsella grandiflora Cagra.2848s0086 I
Cagra.4091s0032 Capsella grandiflora Cagra.4091s0032 I
Carubv10005248m.g Capsella rubella Carubv10005248m.g I
Carubv10023532m.g Capsella rubella Carubv10023532m.g I
Carubv10028492m.g Capsella rubella Carubv10028492m.g I
Ciclev10008192m.g Citrus clementina Ciclev10008192m.g I
Eucgr.C00360 Eucalyptus grandis Eucgr.C00360 I
Eucgr.C02592 Eucalyptus grandis Eucgr.C02592 I
evm.TU.contig_30708.1 Carica papaya evm.TU.contig_30708.1 I
gene10062-v1.0-hybrid Fragaria vesca gene10062-v1.0-hybrid I
Gorai.009G055200 Gossypium raimondii Gorai.009G055200 I
Lus10021846.g Linum usitatissimum Lus10021846.g I
MDP0000121522 Malus domestica MDP0000121522 I
MDP0000534784 Malus domestica MDP0000534784 I
MDP0000606021 Malus domestica MDP0000606021 I
orange1.1g012156m.g Citrus sinensis orange1.1g012156m.g I
Pavir.Aa00205 Panicum virgatum Pavir.Aa00205 I
Pavir.Ab03158 Panicum virgatum Pavir.Ab03158 I
Pavir.Ba01914 Panicum virgatum Pavir.Ba01914 I
Pavir.Ba03672 Panicum virgatum Pavir.Ba03672 I
Pavir.Bb02117 Panicum virgatum Pavir.Bb02117 I
Pavir.Da02078 Panicum virgatum Pavir.Da02078 I
Pavir.J00283 Panicum virgatum Pavir.J00283 I
Pavir.J03221 Panicum virgatum Pavir.J03221 I
Pavir.J04249 Panicum virgatum Pavir.J04249 I
Pavir.J04712 Panicum virgatum Pavir.J04712 I
SapurV1A.0100s0120 Salix purpurea SapurV1A.0100s0120 I
SapurV1A.0347s0080 Salix purpurea SapurV1A.0347s0080 I
Thhalv10000220m.g Eutrema salsugineum Thhalv10000220m.g I
Thhalv10014212m.g Eutrema salsugineum Thhalv10014212m.g I
Thhalv10025656m.g Eutrema salsugineum Thhalv10025656m.g I
PK14040.1 Cannabis sativa PK14040.1 I
chr6.CM0037.770.nc Lotus japonicus chr6.CM0037.770.nc I
AT1G03040 Arabidopsis thaliana AT1G03040 N
UNE12 Arabidopsis thaliana AT4G02590 N
Bo01031s030 Brassica oleracea Bo01031s030 N
Bo2g100750 Brassica oleracea Bo2g100750 N
Bo5g003580 Brassica oleracea Bo5g003580 N
Bo9g005930 Brassica oleracea Bo9g005930 N
Bra000872 Brassica rapa Bra000872 N
Bra018539 Brassica rapa Bra018539 N
Bra033368 Brassica rapa Bra033368 N
Bra036256 Brassica rapa Bra036256 N
fgenesh2_kg.1__235__AT1G03040.1 Arabidopsis lyrata fgenesh2_kg.1__235__AT1G03040.1 N
UNE12 Arabidopsis lyrata fgenesh2_kg.6__3435__AT4G02590.2 N
GLYMA02G16110 Glycine max GLYMA02G16110 N
GLYMA03G31510 Glycine max GLYMA03G31510 N
GLYMA10G03690 Glycine max GLYMA10G03690 N
GLYMA10G30430 Glycine max GLYMA10G30430 N
GLYMA19G34360 Glycine max GLYMA19G34360 N
GLYMA20G36770 Glycine max GLYMA20G36770 N
MTR_1g070870 Medicago truncatula MTR_1g070870 N
MTR_1g080890 Medicago truncatula MTR_1g080890 N
PGSC0003DMG400006089 Solanum tuberosum PGSC0003DMG400006089 N
PGSC0003DMG400013393 Solanum tuberosum PGSC0003DMG400013393 N
POPTR_0002s04620 Populus trichocarpa POPTR_0002s04620 N
PRUPE_ppa008172mg Prunus persica PRUPE_ppa008172mg N
PRUPE_ppa009299mg Prunus persica PRUPE_ppa009299mg N
Solyc03g005350.2 Solanum lycopersicum Solyc03g005350.2 N
Solyc09g083220.2 Solanum lycopersicum Solyc09g083220.2 N
TCM_004217 Theobroma cacao TCM_004217 N
TCM_026346 Theobroma cacao TCM_026346 N
VIT_05s0020g04620 Vitis vinifera VIT_05s0020g04620 N
VIT_07s0141g00220 Vitis vinifera VIT_07s0141g00220 N
VIT_14s0030g02230 Vitis vinifera VIT_14s0030g02230 N
Ca_03755 Cicer arietinum Ca_03755 N
Ca_07790 Cicer arietinum Ca_07790 N
Ca_12194 Cicer arietinum Ca_12194 N
Cla011475 Citrullus lanatus Cla011475 N
Cla015040 Citrullus lanatus Cla015040 N
Pm003525 Prunus mume Pm003525 N
Pm020229 Prunus mume Pm020229 N
29598.m000464 Ricinus communis 29598.m000464 N
29883.m001988 Ricinus communis 29883.m001988 N
cassava18573.valid.m1 Manihot esculenta cassava18573.valid.m1 N
cassava22704.valid.m1 Manihot esculenta cassava22704.valid.m1 N
cassava36725.valid.m1 Manihot esculenta cassava36725.valid.m1 N
Cucsa.289090 Cucumis sativus Cucsa.289090 N
Cucsa.388780 Cucumis sativus Cucsa.388780 N
Aquca_017_00590 Aquilegia coerulea Aquca_017_00590 N
Bostr.2983s0202 Boechera stricta Bostr.2983s0202 N
Cagra.0635s0023 Capsella grandiflora Cagra.0635s0023 N
Cagra.0897s0074 Capsella grandiflora Cagra.0897s0074 N
Carubv10001523m.g Capsella rubella Carubv10001523m.g N
Carubv10009831m.g Capsella rubella Carubv10009831m.g N
Ciclev10001768m.g Citrus clementina Ciclev10001768m.g N
Ciclev10021443m.g Citrus clementina Ciclev10021443m.g N
Eucgr.B01487 Eucalyptus grandis Eucgr.B01487 N
Eucgr.H04337 Eucalyptus grandis Eucgr.H04337 N
evm.TU.supercontig_117.94 Carica papaya evm.TU.supercontig_117.94 N
gene08188-v1.0-hybrid Fragaria vesca gene08188-v1.0-hybrid N
gene16564-v1.0-hybrid Fragaria vesca gene16564-v1.0-hybrid N
Gorai.001G242500 Gossypium raimondii Gorai.001G242500 N
Gorai.007G141800 Gossypium raimondii Gorai.007G141800 N
Gorai.007G277200 Gossypium raimondii Gorai.007G277200 N
Lus10006587.g Linum usitatissimum Lus10006587.g N
Lus10015909.g Linum usitatissimum Lus10015909.g N
MDP0000176749 Malus domestica MDP0000176749 N
MDP0000295593 Malus domestica MDP0000295593 N
orange1.1g022649m.g Citrus sinensis orange1.1g022649m.g N
SapurV1A.0006s1290 Salix purpurea SapurV1A.0006s1290 N
Thhalv10008279m.g Eutrema salsugineum Thhalv10008279m.g N
Thhalv10028824m.g Eutrema salsugineum Thhalv10028824m.g N
PK20184.1 Cannabis sativa PK20184.1 N
PK25419.1 Cannabis sativa PK25419.1 N
chr1.CM0375.380.nc Lotus japonicus chr1.CM0375.380.nc N
chr5.LjT29J15.30.nc Lotus japonicus chr5.LjT29J15.30.nc N