gene28103-v1.0-hybrid (Fragaria vesca)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 gene28103-v1.0-hybrid T071848_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK16335.1
M01157_2.00 		Cannabis sativa
NNNNKACAGCTRN
NYAGCTGTMNNNN		 PBM
Lambert et al.(2019)
pTH10187 		0.832 0.984
PK00315.1
M01153_2.00 		Cannabis sativa
NNGACAGCTRN
NYAGCTGTCNN		 PBM
Lambert et al.(2019)
pTH10085 		0.832 0.952
AtbZIP52
M06746_2.00 		Arabidopsis thaliana
DTGMCAGCYBDNHH
DDNHVRGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP52_colamp_a 		0.818 0.919
AtbZIP52
M06747_2.00 		Arabidopsis thaliana
DTGMCAGCYKDNHN
NDNHMRGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP52_col_v31 		0.818 0.919
BZIP18
M01777_2.00 		Arabidopsis thaliana
NDMCARNHNN
NNDNYTGKHN		 PBM
Weirauch et al.(2014)
pTH7316 		0.817 0.919
BZIP18
M06768_2.00 		Arabidopsis thaliana
DTGMCAGCTDD
HHAGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP18_colamp_a 		0.817 0.919
BZIP18
M06769_2.00 		Arabidopsis thaliana
TGMCAGCTKKN
NMMAGCTGKCA		 Dap-seq
OMalley et al.(2016)
bZIP18_col_v31 		0.817 0.919
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna28103.1-v1.0-hybrid bZIP 224 285

Links

Other bZIP family TFs
Other Fragaria vesca TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HCAG_07413 Histoplasma capsulatum HCAG_07413 D
PHD1 Saccharomyces cerevisiae YKL043W D
SOK2 Saccharomyces cerevisiae YMR016C D
ZBAI_03487 Zygosaccharomyces bailii ZBAI_03487 I
LELG_05390 Lodderomyces elongisporus LELG_05390 I
NCAS_0A04710 Naumovozyma castellii NCAS_0A04710 I
NDAI_0K01760 Naumovozyma dairenensis NDAI_0K01760 I
PAS_chr1-4_0530 Komagataella pastoris PAS_chr1-4_0530 I
PGUG_03651 Meyerozyma guilliermondii PGUG_03651 I
PICST_67427 Scheffersomyces stipitis PICST_67427 I
SKUD_205409 Saccharomyces kudriavzevii SKUD_205409 I
SPAPADRAFT_59209 Spathaspora passalidarum SPAPADRAFT_59209 I
SU7_2011 Saccharomyces arboricola SU7_2011 I
SU7_2504 Saccharomyces arboricola SU7_2504 I
KUCA_T00004103001 Kuraishia capsulata KUCA_T00004103001 I
ZBAI_08486 Zygosaccharomyces bailii ZBAI_08486 I
ZYRO0E06248g Zygosaccharomyces rouxii ZYRO0E06248g I
estExt_fgenesh1_pg.C_chr_3.10654 Pichia stipitis estExt_fgenesh1_pg.C_chr_3.10654 I
Scas_Contig625.8 Saccharomyces castellii Scas_Contig625.8 I
13508_YKL043W Saccharomyces mikatae 13508_YKL043W I
13647_YKL043W Saccharomyces paradoxus 13647_YKL043W I
14607_YKL043W Saccharomyces bayanus 14607_YKL043W I
16462_YMR016C Saccharomyces mikatae 16462_YMR016C I
17269_YMR016C Saccharomyces paradoxus 17269_YMR016C I
17689_YMR016C Saccharomyces bayanus 17689_YMR016C I
Kwal_8176 Kluyveromyces waltii Kwal_8176 I
SAKL0D13442g Lachancea kluyveri SAKL0D13442g I
XP_002490663.1 Pichia pastoris XP_002490663.1 I
CORT_0G01760 Candida orthopsilosis CORT_0G01760 I
CPAG_00178 Candida parapsilosis CPAG_00178 I
PGUG_03651 Candida guilliermondii PGUG_03651 I
AACERI_AaceriABR055C Saccharomycetaceae sp ashbya aceri AACERI_AaceriABR055C I
AGOS_ABR055C Ashbya gossypii AGOS_ABR055C I
AOL_s00083g25 Arthrobotrys oligospora AOL_s00083g25 I
BDDG_09856 Blastomyces dermatitidis BDDG_09856 I
BN7_6724 Wickerhamomyces ciferrii BN7_6724 I
CAGL0L01771g Candida glabrata CAGL0L01771g I
CaO19.610 Candida albicans CaO19.610 I
CaO19.8243 Candida albicans CaO19.8243 I
CD36_33560 Candida dubliniensis CD36_33560 I
CLUG_02047 Clavispora lusitaniae CLUG_02047 I
CLUG_02047 Candida lusitaniae CLUG_02047 I
DEHA2E10978g Debaryomyces hansenii DEHA2E10978g I
Ecym_4584 Eremothecium cymbalariae Ecym_4584 I
G210_4810 Candida maltosa G210_4810 I
GNLVRS01_PISO0E14370g Millerozyma farinosa GNLVRS01_PISO0E14370g I
GNLVRS01_PISO0F15757g Millerozyma farinosa GNLVRS01_PISO0F15757g I
HCBG_04638 Histoplasma capsulatum HCBG_04638 I
HPODL_01835 Ogataea parapolymorpha HPODL_01835 I
HPODL_04965 Ogataea parapolymorpha HPODL_04965 I
JL09_g3139 Pichia kudriavzevii JL09_g3139 I
KAFR_0A02120 Kazachstania africana KAFR_0A02120 I
KAFR_0B01410 Kazachstania africana KAFR_0B01410 I
KLLA0_F04840g Kluyveromyces lactis KLLA0_F04840g I