Pavir.Ea01074 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.Ea01074 T072369_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA6
M01780_2.00 		Arabidopsis thaliana
NNTGACGTMA
TKACGTCANN		 PBM
Weirauch et al.(2014)
pTH8691 		0.787 0.941
TGA6
M01055_2.00 		Arabidopsis thaliana
NNVTGACGTMN
NKACGTCABNN		 PBM
Sullivan et al.(2014)
pTH8858 		0.787 0.941
TGA2
M01784_2.00 		Arabidopsis thaliana
NNACGTCABN
NVTGACGTNN		 PBM
Weirauch et al.(2014)
pTH8820 		0.787 0.941
TGA2
M00856_2.00 		Arabidopsis thaliana
NVTGACGTMN
NKACGTCABN		 PBM
Franco-Zorrilla et al.(2014)
TGA2 		0.787 0.941
TGA5
M01785_2.00 		Arabidopsis thaliana
VTGACGTN
NACGTCAB		 PBM
Weirauch et al.(2014)
pTH8180 		0.787 0.941
TGA2
M06785_2.00 		Arabidopsis thaliana
YNMCGYCABCD
HGVTGRCGKNR		 Dap-seq
OMalley et al.(2016)
TGA2_colamp_v31 		0.787 0.941
TGA2
M06786_2.00 		Arabidopsis thaliana
NNNNNDNHGMTGACGTCAYH
DRTGACGTCAKCDNHNNNNN		 Dap-seq
OMalley et al.(2016)
TGA2_col 		0.787 0.941
TGA5
M06787_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA5_col_v3a 		0.787 0.941
TGA6
M06773_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDNN
NNHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA6_col_a 		0.787 0.941
TGA6
M06774_2.00 		Arabidopsis thaliana
NRTGACGTCAKCDNN
NNHGMTGACGTCAYN		 Dap-seq
OMalley et al.(2016)
TGA6_colamp_a 		0.787 0.941
TGA2
M09917_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA2_01 		0.787 0.941
TGA2
M09918_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA2_Q2 		0.787 0.941
PK09021.1
M01155_2.00 		Cannabis sativa
NNTGACGTMA
TKACGTCANN		 PBM
Lambert et al.(2019)
pTH10175 		0.787 0.922
HBP1B_WHEAT
M10043_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HBP1B_Q6 		0.787 0.922
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea01074.1.p bZIP 42 92

Links

Other bZIP family TFs
Other Panicum virgatum TFs

153 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava40212.m1 Manihot esculenta cassava40212.m1 I
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I
Aquca_013_00424 Aquilegia coerulea Aquca_013_00424 I
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I
mgf018851m Mimulus guttatus mgf018851m I
Cucsa.258020 Cucumis sativus Cucsa.258020 I
Cucsa.158080 Cucumis sativus Cucsa.158080 I
cassava9303.m1 Manihot esculenta cassava9303.m1 I
cassava4119.m1 Manihot esculenta cassava4119.m1 I
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I
cassava28630.m1 Manihot esculenta cassava28630.m1 I
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I
30174.m008961 Ricinus communis 30174.m008961 I
30068.m002623 Ricinus communis 30068.m002623 I
Pm008788 Prunus mume Pm008788 I
Cla021590 Citrullus lanatus Cla021590 I
Cla010474 Citrullus lanatus Cla010474 I
Ca_25424 Cicer arietinum Ca_25424 I
Ca_16397 Cicer arietinum Ca_16397 I
Ca_00417 Cicer arietinum Ca_00417 I
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I
PK28640.1 Cannabis sativa PK28640.1 I
PK25269.1 Cannabis sativa PK25269.1 I
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I
Pavir.J28151 Panicum virgatum Pavir.J28151 I
Pavir.J28133 Panicum virgatum Pavir.J28133 I
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I
MDP0000138669 Malus domestica MDP0000138669 I
MDP0000133476 Malus domestica MDP0000133476 I
Lus10041372.g Linum usitatissimum Lus10041372.g I
Lus10039171.g Linum usitatissimum Lus10039171.g I
Lus10036556.g Linum usitatissimum Lus10036556.g I
Lus10013764.g Linum usitatissimum Lus10013764.g I
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I
Gorai.007G260900 Gossypium raimondii Gorai.007G260900 I
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I
GLYMA07G08542 Glycine max GLYMA07G08542 I
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I
GRMZM2G010100 Zea mays GRMZM2G010100 I
OPUNC09G15300 Oryza punctata OPUNC09G15300 I
ONIVA09G17920 Oryza nivara ONIVA09G17920 I
GRMZM2G018138 Zea mays GRMZM2G018138 I
OMERI09G12500 Oryza meridionalis OMERI09G12500 I
TCM_015579 Theobroma cacao TCM_015579 I
MTR_8g032610 Medicago truncatula MTR_8g032610 I
MTR_7g011630 Medicago truncatula MTR_7g011630 I
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I
MTR_4g082345 Medicago truncatula MTR_4g082345 I
LPERR09G12960 Leersia perrieri LPERR09G12960 I
MLOC_18783 Hordeum vulgare MLOC_18783 I
LPERR12G14340 Leersia perrieri LPERR12G14340 I
GLYMA03G01931 Glycine max GLYMA03G01931 I
TCM_005425 Theobroma cacao TCM_005425 I
AMTR_s00003p00165930 Amborella trichopoda AMTR_s00003p00165930 I
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I
Si032213m.g Setaria italica Si032213m.g I
Si024417m.g Setaria italica Si024417m.g I
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I
BGIOSGA031114 Oryza indica BGIOSGA031114 I
Sb02g030350 Sorghum bicolor Sb02g030350 I
Sb01g014810 Sorghum bicolor Sb01g014810 I
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I
BRADI1G54450 Brachypodium distachyon BRADI1G54450 I
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I
MDP0000316843 Malus domestica MDP0000316843 N
GLYMA20G03890 Glycine max GLYMA20G03890 N
GLYMA15G09190 Glycine max GLYMA15G09190 N
GLYMA13G29920 Glycine max GLYMA13G29920 N
VIT_02s0025g03170 Vitis vinifera VIT_02s0025g03170 N
LjT06B04.30.nd Lotus japonicus LjT06B04.30.nd N
MDP0000127123 Malus domestica MDP0000127123 N
MTR_2g016730 Medicago truncatula MTR_2g016730 N
Lus10008291.g Linum usitatissimum Lus10008291.g N
Gorai.004G127900 Gossypium raimondii Gorai.004G127900 N
gene01844-v1.0-hybrid Fragaria vesca gene01844-v1.0-hybrid N
Eucgr.J01042 Eucalyptus grandis Eucgr.J01042 N
Ciclev10024614m.g Citrus clementina Ciclev10024614m.g N
PGSC0003DMG400005621 Solanum tuberosum PGSC0003DMG400005621 N
POPTR_0001s45740 Populus trichocarpa POPTR_0001s45740 N
mgf024137m Mimulus guttatus mgf024137m N
PRUPE_ppa019500mg Prunus persica PRUPE_ppa019500mg N
Cucsa.193280 Cucumis sativus Cucsa.193280 N
SELMODRAFT_409196 Selaginella moellendorffii SELMODRAFT_409196 N
SELMODRAFT_411255 Selaginella moellendorffii SELMODRAFT_411255 N
Solyc03g119800.1 Solanum lycopersicum Solyc03g119800.1 N
Cla005054 Citrullus lanatus Cla005054 N