Pavir.J05659 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.J05659 T072451_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LOC_Os05g36160
M01825_2.00 		Oryza sativa
MCACGTGK
MCACGTGK		 PBM
Weirauch et al.(2014)
pTH8599 		0.789 0.816
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J05659.1.p bZIP 185 249
Pavir.J05659.2.p bZIP 185 233

Links

Other bZIP family TFs
Other Panicum virgatum TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-70 Caenorhabditis elegans WBGene00003660 D
nhr-86 Caenorhabditis elegans WBGene00003676 D
L892_g8140 Steinernema scapterisci L892_g8140 I
nhr-28 Caenorhabditis elegans WBGene00003624 I
nhr-109 Caenorhabditis elegans WBGene00003699 I
nhr-273 Caenorhabditis elegans WBGene00020460 I
EVEC_0001266201 Enterobius vermicularis EVEC_0001266201 I
L596_g27786 Steinernema carpocapsae L596_g27786 I
L596_g9106 Steinernema carpocapsae L596_g9106 I
L889_g9698 Steinernema feltiae L889_g9698 I
L889_g987 Steinernema feltiae L889_g987 I
L892_g10708 Steinernema scapterisci L892_g10708 I
nhr-16 Caenorhabditis elegans WBGene00003615 I
L892_g8144 Steinernema scapterisci L892_g8144 I
L892_g8145 Steinernema scapterisci L892_g8145 I
L893_g4569 Steinernema glaseri L893_g4569 I
L893_g9517 Steinernema glaseri L893_g9517 I
L898_g10723 Steinernema monticolum L898_g10723 I
L898_g28806 Steinernema monticolum L898_g28806 I
scaffold1235-EXSNAP2012.2 Pristionchus exspectatus scaffold1235-EXSNAP2012.2 I
SMUV_0000801801 Syphacia muris SMUV_0000801801 I
SMUV_0000886001 Syphacia muris SMUV_0000886001 I
SMUV_0000909301 Syphacia muris SMUV_0000909301 I
CJA07390 Caenorhabditis japonica CJA07390 I
CBG03687 Caenorhabditis briggsae CBG03687 I
CBG03688 Caenorhabditis briggsae CBG03688 I
CBG12152 Caenorhabditis briggsae CBG12152 I
CBG16375 Caenorhabditis briggsae CBG16375 I
CBG20699 Caenorhabditis briggsae CBG20699 I
CBN03440 Caenorhabditis brenneri CBN03440 I
CBN03769 Caenorhabditis brenneri CBN03769 I
CBN04619 Caenorhabditis brenneri CBN04619 I
CBN16902 Caenorhabditis brenneri CBN16902 I
CBN24070 Caenorhabditis brenneri CBN24070 I
CJA04414 Caenorhabditis japonica CJA04414 I
CJA10576 Caenorhabditis japonica CJA10576 I
CRE07801 Caenorhabditis remanei CRE07801 I
CRE17310 Caenorhabditis remanei CRE17310 I
CRE17355 Caenorhabditis remanei CRE17355 I
CRE18529 Caenorhabditis remanei CRE18529 I
CRE27174 Caenorhabditis remanei CRE27174 I
CRE27659 Caenorhabditis remanei CRE27659 I
PPA29361 Pristionchus pacificus PPA29361 I
nhr-12 Caenorhabditis elegans WBGene00003611 I
CBG01395 Caenorhabditis briggsae CBG01395 N
CRE17311 Caenorhabditis remanei CRE17311 N