HmN_000890700 (Hymenolepis microstoma)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 HmN_000890700 T074557_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CREM
M04229_2.00 		Homo sapiens
VVTBACGTVABN
NVTBACGTVABB		 SELEX
Yin et al.(2017)
CREM_eDBD_HT-SELEX 		0.822 0.586
CREM
M08784_2.00 		Homo sapiens
SVVTGACGTSA
TSACGTCABBS		 Misc
Kulakovskiy et al.(2013)
CREM_HUMAN.H11MO.0.C 		0.822 0.586
CREM
M09930_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREM_Q6_01 		0.822 0.586
CREM
M09931_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREM_Q6 		0.822 0.586
CREM
M04230_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
CREM_eDBD_Methyl-HT-SELEX 		0.822 0.586
ATF1
M08792_2.00 		Homo sapiens
HBRCGTCAYHN
NDRTGACGYVD		 Misc
Kulakovskiy et al.(2013)
ATF1_HUMAN.H11MO.0.B 		0.816 0.638
ATF1
M09485_2.00 		Homo sapiens
NVTGACGTMA
TKACGTCABN		 Misc
Heinz et al.(2010)
K562-ATF1_GSE31477 		0.816 0.638
ATF1
M09956_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF1_Q3 		0.816 0.638
ATF1
M09957_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF1_Q6_01 		0.816 0.638
ATF1
M09958_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF1_Q6 		0.816 0.638
Crem
M01821_2.00 		Mus musculus
NRTKACGTMN
NKACGTMAYN		 PBM
Weirauch et al.(2014)
pTH5002 		0.816 0.621
Crem
M08845_2.00 		Mus musculus
SVVTGACGTSA
TSACGTCABBS		 Misc
Kulakovskiy et al.(2013)
CREM_MOUSE.H11MO.0.C 		0.816 0.621
Creb1
M00992_2.00 		Mus musculus
NNTGACGTCV
BGACGTCANN		 PBM
Mann et al.(2013)
CREB1_UM_HK 		0.811 0.621
Creb1
M01806_2.00 		Mus musculus
VTKACGHNN
NNDCGTMAB		 PBM
Weirauch et al.(2014)
pTH5080 		0.811 0.621
CREB1
M04264_2.00 		Homo sapiens
NVTKACGTMABN
NVTKACGTMABN		 SELEX
Yin et al.(2017)
CREB1_FL_HT-SELEX 		0.811 0.621
CREB1
M04258_2.00 		Homo sapiens
NVTKACGTMANN
NNTKACGTMABN		 SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_1 		0.811 0.621
CREB1
M04259_2.00 		Homo sapiens
NRTGACGTR
YACGTCAYN		 SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_2 		0.811 0.621
CREB1
M04260_2.00 		Homo sapiens
VTSACRYGWBAY
RTVWCRYGTSAB		 SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_3 		0.811 0.621
CREB1
M04022_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Rodriguez-Martinez et al.(2017)
CREB1.1 		0.811 0.621
CREB1
M04023_2.00 		Homo sapiens
RTGACGTADB
VHTACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
CREB1.2 		0.811 0.621
CREB1
M08066_2.00 		Homo sapiens
NVTGACGTCABN
NVTGACGTCABN		 ChIP-seq
Mathelier et al.(2014)
MA0018.3 		0.811 0.621
CREB1
M08791_2.00 		Homo sapiens
WKRCGTCAYYN
NRRTGACGYMW		 Misc
Kulakovskiy et al.(2013)
CREB1_HUMAN.H11MO.0.A 		0.811 0.621
Creb1
M08824_2.00 		Mus musculus
WKRCGTCAYYN
NRRTGACGYMW		 Misc
Kulakovskiy et al.(2013)
CREB1_MOUSE.H11MO.0.A 		0.811 0.621
CREB1
M09948_2.00 		Homo sapiens
TGACGTMW
WKACGTCA		 Transfac
Matys et al.(2006)
V$CREB_01 		0.811 0.621
CREB1
M09949_2.00 		Homo sapiens
BBGDTGACGYVV
BBRCGTCAHCVV		 Transfac
Matys et al.(2006)
V$CREB_02 		0.811 0.621
CREB1
M09950_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREB1_Q3 		0.811 0.621
CREB1
M09951_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREB1_Q6 		0.811 0.621
CREB1
M09952_2.00 		Homo sapiens
BSTGACGYARNN
NNYTRCGTCASV		 Transfac
Matys et al.(2006)
V$CREB_Q2 		0.811 0.621
CREB1
M09953_2.00 		Homo sapiens
BSTGACGYMRBV
BVYKRCGTCASV		 Transfac
Matys et al.(2006)
V$CREB_Q4 		0.811 0.621
CREB1
M09954_2.00 		Homo sapiens
KKGGGKTGACGYMND
HNKRCGTCAMCCCMM		 Transfac
Matys et al.(2006)
V$TAXCREB_01 		0.811 0.621
CREB1
M09955_2.00 		Homo sapiens
RTGACGCATAYCCCC
GGGGRTATGCGTCAY		 Transfac
Matys et al.(2006)
V$TAXCREB_02 		0.811 0.621
Creb1
M00991_2.00 		Mus musculus
NNRTGACGYVN
NBRCGTCAYNN		 PBM
Mann et al.(2013)
CREB1_M_HK 		0.811 0.621
CREB1
M04265_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
CREB1_FL_Methyl-HT-SELEX 		0.811 0.621
CREB1
M04261_2.00 		Homo sapiens
BRTGAYGYGND
HNCRCRTCAYV		 SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_1 		0.811 0.621
CREB1
M04262_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_2 		0.811 0.621
CREB1
M04263_2.00 		Homo sapiens
NRTGACGYV
BRCGTCAYN		 SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_3 		0.811 0.621
Atf1
M00124_2.00 		Mus musculus
NNNNDNDNNN
NNNHNHNNNN		 PBM
Badis et al.(2009)
Atf1_3026 		0.805 0.621
Atf1
M01804_2.00 		Mus musculus
RTGACGTV
BACGTCAY		 PBM
Weirauch et al.(2014)
pTH5005 		0.805 0.621
Atf1
M08820_2.00 		Mus musculus
VTGACGTSAV
BTSACGTCAB		 Misc
Kulakovskiy et al.(2013)
ATF1_MOUSE.H11MO.0.B 		0.805 0.621
CrebB-17A
M03659_2.00 		Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY		 SELEX
Nitta et al.(2015)
CrebB-17A_1 		0.786 0.621
CrebB-17A
M03660_2.00 		Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY		 SELEX
Nitta et al.(2015)
CrebB-17A_2 		0.786 0.621
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HmN_000890700 bZIP 349 406

Links

Other bZIP family TFs
Other Hymenolepis microstoma TFs

353 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_10.263 Carica papaya evm.TU.supercontig_10.263 N 0.000
Sb08g022000 Sorghum bicolor Sb08g022000 N 0.000
Si035862m.g Setaria italica Si035862m.g N 0.000
Traes_5AS_BABE20FBA Triticum aestivum Traes_5AS_BABE20FBA N 0.000
Traes_5BS_19E54A2E0 Triticum aestivum Traes_5BS_19E54A2E0 N 0.000
Traes_5DS_438FF99FC Triticum aestivum Traes_5DS_438FF99FC N 0.000
TRIUR3_27778 Triticum urartu TRIUR3_27778 N 0.000
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.000
Pm027560 Prunus mume Pm027560 N 0.000
Cucsa.132180 Cucumis sativus Cucsa.132180 N 0.000
Sb01g013320 Sorghum bicolor Sb01g013320 N 0.000
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.000
MDP0000152128 Malus domestica MDP0000152128 N 0.000
MDP0000574053 Malus domestica MDP0000574053 N 0.000
Pavir.Ca02859 Panicum virgatum Pavir.Ca02859 N 0.000
Pavir.Ia01134 Panicum virgatum Pavir.Ia01134 N 0.000
Pavir.Ib04134 Panicum virgatum Pavir.Ib04134 N 0.000
Pavir.J29994 Panicum virgatum Pavir.J29994 N 0.000
PK04144.1 Cannabis sativa PK04144.1 N 0.000
OB12G26010 Oryza brachyantha OB12G26010 N 0.000
BGIOSGA035814 Oryza indica BGIOSGA035814 N 0.000
BRADI4G21540 Brachypodium distachyon BRADI4G21540 N 0.000
F775_32078 Aegilops tauschii F775_32078 N 0.000
GRMZM2G022365 Zea mays GRMZM2G022365 N 0.000
GRMZM2G157470 Zea mays GRMZM2G157470 N 0.000
GSMUA_Achr2G12870_001 Musa acuminata GSMUA_Achr2G12870_001 N 0.000
GSMUA_Achr7G01310_001 Musa acuminata GSMUA_Achr7G01310_001 N 0.000
LPERR12G16300 Leersia perrieri LPERR12G16300 N 0.000
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N 0.000
OBART12G19140 Oryza barthii OBART12G19140 N 0.000
OGLUM12G20810 Oryza glumaepatula OGLUM12G20810 N 0.000
OMERI12G13490 Oryza meridionalis OMERI12G13490 N 0.000
ONIVA02G25900 Oryza nivara ONIVA02G25900 N 0.000
OPUNC12G17310 Oryza punctata OPUNC12G17310 N 0.000
ORUFI12G21360 Oryza rufipogon ORUFI12G21360 N 0.000
OS12G0620400 Oryza sativa OS12G0620400 N 0.000
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.000