CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACYPI007319
(
Acyrthosiphon pisum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ACYPI007319
T079726_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BCL11B
M04453_2.00
Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX
0.763
0.858
BCL11B
M04454_2.00
Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX
0.763
0.858
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACYPI007319-PA
C2H2 ZF
565
586
ECEYCGKKFRFLSNLIVHRRTH
ACYPI007319-PA
C2H2 ZF
592
614
YKCSVCDHACTQSSKLKRHMKTH
ACYPI007319-PA
C2H2 ZF
970
992
DTCEYCGKVFKNCSNLTVHRRSH
ACYPI007319-PA
C2H2 ZF
998
1020
YKCELCSYACAQSSKLTRHMKTH
ACYPI007319-PA
C2H2 ZF
1028
1049
YRCRFCEMPFSVPSTLEKHMRK
Links
Other
C2H2 ZF
family TFs
Other
Acyrthosiphon pisum
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BCL11B
Homo sapiens
ENSG00000127152
D
0.763
PHUM606430
Pediculus humanus
PHUM606430
I
0.797
BCL11B
Pan troglodytes
ENSPTRG00000006707
I
0.763
BCL11B
Pteropus vampyrus
ENSPVAG00000015516
I
0.763
Bcl11b
Rattus norvegicus
ENSRNOG00000005776
I
0.763
ENSSHAG00000009291
Sarcophilus harrisii
ENSSHAG00000009291
I
0.763
BCL11B
Sus scrofa
ENSSSCG00000002507
I
0.763
ENSSTOG00000021531
Ictidomys tridecemlineatus
ENSSTOG00000021531
I
0.763
BCL11B
Taeniopygia guttata
ENSTGUG00000012711
I
0.763
im:7142702
Takifugu rubripes
ENSTRUG00000018074
I
0.758
BCL11B
Tursiops truncatus
ENSTTRG00000012140
I
0.757
ENSXMAG00000019910
Xiphophorus maculatus
ENSXMAG00000019910
I
0.761
ISCW016418
Ixodes scapularis
ISCW016418
I
0.776
L798_02171
Zootermopsis nevadensis
L798_02171
I
0.797
LotgiG139415
Lottia gigantea
LotgiG139415
I
0.765
ENSPPYG00000006131
Pongo abelii
ENSPPYG00000006131
I
0.763
RPRC001562
Rhodnius prolixus
RPRC001562
I
0.796
SMAR003355
Strigamia maritima
SMAR003355
I
0.783
Aan_R000616
Calypte anna
Aan_R000616
I
0.763
Afo_R004626
Aptenodytes forsteri
Afo_R004626
I
0.763
Cmyd_10012109
Chelonia mydas
Cmyd_10012109
I
0.763
ENSP00000349723
Macaca fascicularis
ENSP00000349723
I
0.759
Gfo_R006733
Geospiza fortis
Gfo_R006733
I
0.763
Pvit_09536
Pogona vitticeps
Pvit_09536
I
0.763
Ocbimv22018271m.g
Octopus bimaculoides
Ocbimv22018271m.g
I
0.779
Sakowv30026316m.g
Saccoglossus kowalevskii
Sakowv30026316m.g
I
0.760
HHAL008065-PA
Halyomorpha halys
HHAL008065-PA
I
0.786
BGLB012676
Biomphalaria glabrata
BGLB012676
I
0.761
BCL11B
Gorilla gorilla
ENSGGOG00000001232
I
0.763
ENSAMXG00000015839
Astyanax mexicanus
ENSAMXG00000015839
I
0.763
ENSAMXG00000018130
Astyanax mexicanus
ENSAMXG00000018130
I
0.761
ENSAPLG00000006283
Anas platyrhynchos
ENSAPLG00000006283
I
0.763
BCL11B
Bos taurus
ENSBTAG00000018019
I
0.763
BCL11B
Canis familiaris
ENSCAFG00000017809
I
0.763
BCL11B
Callithrix jacchus
ENSCJAG00000006713
I
0.763
ENSCPOG00000009946
Cavia porcellus
ENSCPOG00000009946
I
0.763
ENSCSAG00000010477
Chlorocebus sabaeus
ENSCSAG00000010477
I
0.763
im:7142702
Danio rerio
ENSDARG00000067727
I
0.761
BCL11B
Dasypus novemcinctus
ENSDNOG00000012677
I
0.763
im:7142702
Gasterosteus aculeatus
ENSGACG00000005537
I
0.761
ENSGALG00000011127
Gallus gallus
ENSGALG00000011127
I
0.763
ENSGALG00000028278
Gallus gallus
ENSGALG00000028278
I
0.763
ENSPSIG00000013079
Pelodiscus sinensis
ENSPSIG00000013079
I
0.763
BCL11B
Loxodonta africana
ENSLAFG00000009254
I
0.763
BCL11B
Macaca mulatta
ENSMMUG00000003261
I
0.763
BCL11B
Monodelphis domestica
ENSMODG00000012964
I
0.763
Bcl11b
Mus musculus
ENSMUSG00000048251
I
0.763
ENSNLEG00000000711
Nomascus leucogenys
ENSNLEG00000000711
I
0.763
BCL11B
Ornithorhynchus anatinus
ENSOANG00000014770
I
0.763
BCL11B
Otolemur garnettii
ENSOGAG00000033204
I
0.763
ENSONIG00000001067
Oreochromis niloticus
ENSONIG00000001067
I
0.758
im:7142702
Oryzias latipes
ENSORLG00000010488
I
0.763
ENSPANG00000004313
Papio anubis
ENSPANG00000004313
I
0.763
ENSPFOG00000003609
Poecilia formosa
ENSPFOG00000003609
I
0.761
ENSACAG00000013085
Anolis carolinensis
ENSACAG00000013085
I
0.763