CBG04163 (Caenorhabditis briggsae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBG04163 T082885_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
C55C2.1_CONSTRUCT
M00649_2.00 		PBM CONSTRUCTS
NHYDHHNNN
NNNDDHRDN		 PBM
Narasimhan et al.(2015)
pTH10623 		0.808 0.926
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG04163 C2H2 ZF 101 123
CBG04163 C2H2 ZF 129 151
CBG04163 C2H2 ZF 157 178

Links

Other C2H2 ZF family TFs
Other Caenorhabditis briggsae TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WBGene00245863 Onchocerca volvulus WBGene00245863 I
nOo.2.0.1.g09798 Onchocerca ochengi nOo.2.0.1.g09798 I
OESDEN_06135 Oesophagostomum dentatum OESDEN_06135 I 0.757
SMUV_0000156601 Syphacia muris SMUV_0000156601 I 0.765
TCLT_0000703901 Thelazia callipaeda TCLT_0000703901 I
BXY_0687500 Bursaphelenchus xylophilus BXY_0687500 N
L889_g2035 Steinernema feltiae L889_g2035 N
L892_g12756 Steinernema scapterisci L892_g12756 N
PTRK_0001695200 Parastrongyloides trichosuri PTRK_0001695200 N
SPAL_0000568700 Strongyloides papillosus SPAL_0000568700 N
SSTP_0000185400 Strongyloides stercoralis SSTP_0000185400 N
SVE_0408900 Strongyloides venezuelensis SVE_0408900 N