CRE00192 (Caenorhabditis remanei)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CRE00192 T084954_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
odd-2
M00618_2.00 		Caenorhabditis elegans
NGCTACYGK
MCRGTAGCN		 PBM
Narasimhan et al.(2015)
pTH9150 		0.820 0.957
Osr2
M00132_2.00 		Mus musculus
NGCTWCYGNN
NNCRGWAGCN		 PBM
Badis et al.(2009)
Osr2_1727 		0.766 0.812
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE00192 C2H2 ZF 125 147
CRE00192 C2H2 ZF 153 175
CRE00192 C2H2 ZF 181 203

Links

Other C2H2 ZF family TFs
Other Caenorhabditis remanei TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
odd-2 Caenorhabditis elegans WBGene00003846 D 0.820
Osr2 Mus musculus ENSMUSG00000022330 D 0.766
OSR2 Homo sapiens ENSG00000164920 D 0.766
osr2.L Xenopus laevis XB-GENE-864802 I 0.766
ASU_07002 Ascaris suum ASU_07002 I 0.760
ANCDUO_21978 Ancylostoma duodenale ANCDUO_21978 I 0.786
ANCCEY_10108 Ancylostoma ceylanicum ANCCEY_10108 I 0.786
ANCCAN_29852 Ancylostoma caninum ANCCAN_29852 I 0.786
ACOC_0001130401 Angiostrongylus costaricensis ACOC_0001130401 I 0.780
ACAC_0000529401 Angiostrongylus cantonensis ACAC_0000529401 I 0.780
DICVIV_08037 Dictyocaulus viviparus DICVIV_08037 I 0.786
osr2.S Xenopus laevis XB-GENE-6254720 I 0.766
Ogr10172 Ophisaurus gracilis Ogr10172 I 0.766
Gfo_R006005 Geospiza fortis Gfo_R006005 I 0.766
ENSBTAP00000017584-D1 Bos grunniens ENSBTAP00000017584-D1 I 0.766
Alligator_sinensis_CCG020374.1 Alligator sinensis Alligator_sinensis_CCG020374.1 I 0.766
WBGene00239217 Onchocerca volvulus WBGene00239217 I 0.760
Ppa-odd-1 Pristionchus pacificus PPA09938 I 0.762
nAv.1.0.1.g06169 Acanthocheilonema viteae nAv.1.0.1.g06169 I 0.760
TCNE_0000229401 Toxocara canis TCNE_0000229401 I 0.760
SMUV_0000818001 Syphacia muris SMUV_0000818001 I 0.764
scaffold395-EXSNAP2012.4 Pristionchus exspectatus scaffold395-EXSNAP2012.4 I 0.762
nOo.2.0.1.g01159 Onchocerca ochengi nOo.2.0.1.g01159 I 0.760
nLs.2.1.2.g06827 Litomosoides sigmodontis nLs.2.1.2.g06827 I 0.760
NECAME_08408 Necator americanus NECAME_08408 I 0.783
nDi.2.2.2.g05871 Dirofilaria immitis nDi.2.2.2.g05871 I 0.763
NBR_0000990501 Nippostrongylus brasiliensis NBR_0000990501 I 0.786
BTMF_0000075201 Brugia timori BTMF_0000075201 I 0.764
HPLM_0001493201 Haemonchus placei HPLM_0001493201 I 0.780
HCOI00889400 Haemonchus contortus HCOI00889400 I 0.780
GPUH_0001513701 Gongylonema pulchrum GPUH_0001513701 I 0.764
EVEC_0001078501 Enterobius vermicularis EVEC_0001078501 I 0.760
EEL_0000443001 Elaeophora elaphi EEL_0000443001 I 0.760
DME_0000745901 Dracunculus medinensis DME_0000745901 I 0.763
LotgiG102775 Lottia gigantea LotgiG102775 I 0.774
ENSCING00000006616 Ciona intestinalis ENSCING00000006616 I 0.770
ENSLOCG00000009790 Lepisosteus oculatus ENSLOCG00000009790 I 0.766
ENSLAFG00000009420 Loxodonta africana ENSLAFG00000009420 I 0.766
ENSGMOG00000016368 Gadus morhua ENSGMOG00000016368 I 0.766
osr2 Gasterosteus aculeatus ENSGACG00000003524 I 0.766
ENSFCAG00000014220 Felis catus ENSFCAG00000014220 I 0.766
osr2 Danio rerio ENSDARG00000038006 I 0.766
ENSCSAG00000012312 Chlorocebus sabaeus ENSCSAG00000012312 I 0.766
ENSCPOG00000020572 Cavia porcellus ENSCPOG00000020572 I 0.766
ENSMLUG00000013412 Myotis lucifugus ENSMLUG00000013412 I 0.766
ENSBTAG00000013213 Bos taurus ENSBTAG00000013213 I 0.766
ENSAMXG00000014504 Astyanax mexicanus ENSAMXG00000014504 I 0.766
ENSACAG00000016280 Anolis carolinensis ENSACAG00000016280 I 0.766
CJA04579 Caenorhabditis japonica CJA04579 I 0.820
CGI_10012022 Crassostrea gigas CGI_10012022 I 0.767
CBN15373 Caenorhabditis brenneri CBN15373 I 0.824
CBG14844 Caenorhabditis briggsae CBG14844 I 0.824
LotgiG130661 Lottia gigantea LotgiG130661 I 0.783
ENSMPUG00000015246 Mustela putorius furo ENSMPUG00000015246 I 0.766
ENSOCUG00000022383 Oryctolagus cuniculus ENSOCUG00000022383 I 0.766
ENSPANG00000012764 Papio anubis ENSPANG00000012764 I 0.766
ENSPFOG00000012273 Poecilia formosa ENSPFOG00000012273 I 0.766
ENSPSIG00000011787 Pelodiscus sinensis ENSPSIG00000011787 I 0.766
Osr2 Rattus norvegicus ENSRNOG00000011136 I 0.766
ENSSHAG00000007793 Sarcophilus harrisii ENSSHAG00000007793 I 0.766
OSR2 Sus scrofa ENSSSCG00000006073 I 0.766
ENSSTOG00000021263 Ictidomys tridecemlineatus ENSSTOG00000021263 I 0.766
ENSTGUG00000012027 Taeniopygia guttata ENSTGUG00000012027 I 0.766
osr2 Tetraodon nigroviridis ENSTNIG00000013301 I 0.766
osr2 Takifugu rubripes ENSTRUG00000011070 I 0.766
ENSXMAG00000002498 Xiphophorus maculatus ENSXMAG00000002498 I 0.766
LOAG_00579 Loa loa LOAG_00579 I 0.760
Bm9236 Brugia malayi Bm9236 I 0.764