CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLACG00000010143
(
Latimeria chalumnae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSLACG00000010143
T097061_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLACP00000011527
C2H2 ZF
208
230
YRCRMCSITFYSKSEMQLHAKSH
ENSLACP00000011527
C2H2 ZF
236
258
HKCPHCSKTFANSSYLAQHIRIH
ENSLACP00000011527
C2H2 ZF
264
286
YTCNYCQKSFRQLSHLQQHTRIH
ENSLACP00000011527
C2H2 ZF
292
316
YKCAHPGCEKAFTQLSNLQSHRRQH
ENSLACP00000011527
C2H2 ZF
322
344
FKCHNCHRAYTDASSLEVHLSTH
ENSLACP00000011527
C2H2 ZF
352
374
YTCSICSRAYTSETYLMKHMRKH
ENSLACP00000011528
C2H2 ZF
210
232
YRCRMCSITFYSKSEMQLHAKSH
ENSLACP00000011528
C2H2 ZF
238
260
HKCPHCSKTFANSSYLAQHIRIH
ENSLACP00000011528
C2H2 ZF
266
294
YTCNYCQKSFRQLSHLQQHTRFPCHLACT
ENSLACP00000011528
C2H2 ZF
347
371
YKCAHPGCEKAFTQLSNLQSHRRQH
ENSLACP00000011528
C2H2 ZF
377
399
FKCHNCHRAYTDASSLEVHLSTH
ENSLACP00000011528
C2H2 ZF
407
429
YTCSICSRAYTSETYLMKHMRKH
Links
Other
C2H2 ZF
family TFs
Other
Latimeria chalumnae
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00057p00206030
Amborella trichopoda
AMTR_s00057p00206030
N
0.000
GRMZM2G106613
Zea mays
GRMZM2G106613
N
0.000
GSMUA_Achr1G11230_001
Musa acuminata
GSMUA_Achr1G11230_001
N
0.000
Sb03g045030
Sorghum bicolor
Sb03g045030
N
0.000
Ca_00942
Cicer arietinum
Ca_00942
N
0.000
mgf010586m
Mimulus guttatus
mgf010586m
N
0.000
evm.TU.supercontig_9.189
Carica papaya
evm.TU.supercontig_9.189
N
0.000
Lus10009816.g
Linum usitatissimum
Lus10009816.g
N
0.000
Lus10040921.g
Linum usitatissimum
Lus10040921.g
N
0.000
Pavir.Ea03823
Panicum virgatum
Pavir.Ea03823
N
0.000
Pavir.Eb03820
Panicum virgatum
Pavir.Eb03820
N
0.000