PATZ1 (Myotis lucifugus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMLUG00000009942 T098864_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PATZ1
M08287_2.00 		Homo sapiens
CCCCDCCC
GGGHGGGG		 ChIP-seq
Schmitges et al.(2016)
Q9HBE1.MEME 		0.827 1.000
PATZ1
M08864_2.00 		Homo sapiens
NYBCHNBYBCMKYCYCYBCCMY
RKGGVRGRGRMKGVRVNDGVRN		 Misc
Kulakovskiy et al.(2013)
PATZ1_HUMAN.H11MO.0.C 		0.827 1.000
PATZ1
M10137_2.00 		Homo sapiens
NDDCCCCCCCCSH
DSGGGGGGGGHHN		 Transfac
Matys et al.(2006)
V$MAZR_01 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMLUP00000009055 C2H2 ZF 292 314
ENSMLUP00000009055 C2H2 ZF 356 377
ENSMLUP00000009055 C2H2 ZF 383 405
ENSMLUP00000009055 C2H2 ZF 413 436
ENSMLUP00000009055 C2H2 ZF 442 464
ENSMLUP00000009055 C2H2 ZF 496 518
ENSMLUP00000022443 C2H2 ZF 292 314
ENSMLUP00000022443 C2H2 ZF 356 377
ENSMLUP00000022443 C2H2 ZF 383 405
ENSMLUP00000022443 C2H2 ZF 413 436
ENSMLUP00000022443 C2H2 ZF 442 464

Links

Other C2H2 ZF family TFs
Other Myotis lucifugus TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZHD7 Oryza sativa OS02G0706600 D
gene14755-v1.0-hybrid Fragaria vesca gene14755-v1.0-hybrid I
Ca_12172 Cicer arietinum Ca_12172 I
29983.m003297 Ricinus communis 29983.m003297 I
cassava39895.m1 Manihot esculenta cassava39895.m1 I
mgf024641m Mimulus guttatus mgf024641m I
mgf026503m Mimulus guttatus mgf026503m I
Carubv10028391m.g Capsella rubella Carubv10028391m.g I
Ciclev10027184m.g Citrus clementina Ciclev10027184m.g I
Eucgr.I00022 Eucalyptus grandis Eucgr.I00022 I
Ca_02034 Cicer arietinum Ca_02034 I
Gorai.012G046200 Gossypium raimondii Gorai.012G046200 I
Lus10015900.g Linum usitatissimum Lus10015900.g I
MDP0000804580 Malus domestica MDP0000804580 I
Pavir.Aa00802 Panicum virgatum Pavir.Aa00802 I
Pavir.Ab02855 Panicum virgatum Pavir.Ab02855 I
SapurV1A.0185s0100 Salix purpurea SapurV1A.0185s0100 I
GLYMA20G35690 Glycine max GLYMA20G35690 I
TCM_001660 Theobroma cacao TCM_001660 I
Si020227m.g Setaria italica Si020227m.g I
SELMODRAFT_59936 Selaginella moellendorffii SELMODRAFT_59936 I
SELMODRAFT_49899 Selaginella moellendorffii SELMODRAFT_49899 I
Sb04g030480 Sorghum bicolor Sb04g030480 I
Q0DYA2_ORYSJ Oryza sativa Q0DYA2_ORYSJ I
PRUPE_ppa020272mg Prunus persica PRUPE_ppa020272mg I
POPTR_0004s14270 Populus trichocarpa POPTR_0004s14270 I
OPUNC02G27120 Oryza punctata OPUNC02G27120 I
OMERI02G28440 Oryza meridionalis OMERI02G28440 I
OGLUM02G30190 Oryza glumaepatula OGLUM02G30190 I
MLOC_18998 Hordeum vulgare MLOC_18998 I
LPERR02G24020 Leersia perrieri LPERR02G24020 I
Traes_4AL_5659286D11 Triticum aestivum Traes_4AL_5659286D11 N
Pavir.J22932 Panicum virgatum Pavir.J22932 N