CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZBTB12
(
Macaca mulatta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMMUG00000011683
T099351_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zbtb12
M00146_2.00
Mus musculus
NGTTCTARRN
NYYTAGAACN
PBM
Badis et al.(2009)
Zbtb12_2932
0.827
1.000
ZBTB12
M04633_2.00
Homo sapiens
RGCTGRRCCGCGYN
NRCGCGGYYCAGCY
SELEX
Yin et al.(2017)
ZBTB12_eDBD_HT-SELEX_1
0.827
1.000
ZBTB12
M04634_2.00
Homo sapiens
AVGACGGCAGGCCB
VGGCCTGCCGTCBT
SELEX
Yin et al.(2017)
ZBTB12_eDBD_HT-SELEX_2
0.827
1.000
ZBTB12
M08389_2.00
Homo sapiens
CTAGAACMB
VKGTTCTAG
ChIP-seq
Schmitges et al.(2016)
Q9Y330_1-3.RCADE
0.827
1.000
ZBTB12
M08269_2.00
Homo sapiens
NNRDTCTAGAACVYNNN
NNNRBGTTCTAGAHYNN
ChIP-seq
Najafabadi et al.(2015b)
ZBTB12
0.827
1.000
ZBTB12
M04635_2.00
Homo sapiens
AGCTGRRCCGCGYN
NRCGCGGYYCAGCT
SELEX
Yin et al.(2017)
ZBTB12_eDBD_Methyl-HT-SELEX_1
0.827
1.000
ZBTB12
M04636_2.00
Homo sapiens
RMGACGDCAGGCCW
WGGCCTGHCGTCKY
SELEX
Yin et al.(2017)
ZBTB12_eDBD_Methyl-HT-SELEX_2
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMMUP00000015335
C2H2 ZF
359
381
FMCPRCGKQFNHSSNLNRHMNVH
ENSMMUP00000015335
C2H2 ZF
387
409
HSCGICGKCFTQKSTLHDHLNLH
ENSMMUP00000015335
C2H2 ZF
415
438
YRCSYCDVRFAHKPAIRRHLKEQH
Links
Other
C2H2 ZF
family TFs
Other
Macaca mulatta
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0013s11930
Populus trichocarpa
POPTR_0013s11930
N
POPTR_0019s11540
Populus trichocarpa
POPTR_0019s11540
N
PRUPE_ppa017519mg
Prunus persica
PRUPE_ppa017519mg
N
TCM_036707
Theobroma cacao
TCM_036707
N
29728.m000844
Ricinus communis
29728.m000844
N
cassava27916.m1
Manihot esculenta
cassava27916.m1
N
Eucgr.F02630
Eucalyptus grandis
Eucgr.F02630
N
Gorai.009G289600
Gossypium raimondii
Gorai.009G289600
N
Lus10014822.g
Linum usitatissimum
Lus10014822.g
N
SapurV1A.0179s0200
Salix purpurea
SapurV1A.0179s0200
N
SapurV1A.2874s0010
Salix purpurea
SapurV1A.2874s0010
N