PRDM6 (Monodelphis domestica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMODG00000013415 T100013_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM6
M08277_2.00 		Homo sapiens
TTTTYYWBHHTTTYYHYTBYN
NRVARDRRAAADDVWRRAAAA		 ChIP-seq
Schmitges et al.(2016)
Q9NQX0.MEME 		0.827 1.000
PRDM6
M08855_2.00 		Homo sapiens
NNKTTTTCYYBYB
VRVRRGAAAAMNN		 Misc
Kulakovskiy et al.(2013)
PRDM6_HUMAN.H11MO.0.C 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000016775 C2H2 ZF 482 503
ENSMODP00000016775 C2H2 ZF 510 532
ENSMODP00000016775 C2H2 ZF 538 560
ENSMODP00000016775 C2H2 ZF 566 587

Links

Other C2H2 ZF family TFs
Other Monodelphis domestica TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
odd-2 Caenorhabditis elegans WBGene00003846 D
Osr2 Mus musculus ENSMUSG00000022330 D
OSR2 Homo sapiens ENSG00000164920 D
osr2.S Xenopus laevis XB-GENE-6254720 I
ASU_07002 Ascaris suum ASU_07002 I
ANCDUO_21978 Ancylostoma duodenale ANCDUO_21978 I
ANCCEY_10108 Ancylostoma ceylanicum ANCCEY_10108 I
ANCCAN_29852 Ancylostoma caninum ANCCAN_29852 I
ACOC_0001130401 Angiostrongylus costaricensis ACOC_0001130401 I
ACAC_0000529401 Angiostrongylus cantonensis ACAC_0000529401 I
osr2.L Xenopus laevis XB-GENE-864802 I
BTMF_0000075201 Brugia timori BTMF_0000075201 I
Ogr10172 Ophisaurus gracilis Ogr10172 I
Gfo_R006005 Geospiza fortis Gfo_R006005 I
ENSBTAP00000017584-D1 Bos grunniens ENSBTAP00000017584-D1 I
Alligator_sinensis_CCG020374.1 Alligator sinensis Alligator_sinensis_CCG020374.1 I
WBGene00239217 Onchocerca volvulus WBGene00239217 I
Ppa-odd-1 Pristionchus pacificus PPA09938 I
LotgiG130661 Lottia gigantea LotgiG130661 I
nAv.1.0.1.g06169 Acanthocheilonema viteae nAv.1.0.1.g06169 I
TCNE_0000229401 Toxocara canis TCNE_0000229401 I
SMUV_0000818001 Syphacia muris SMUV_0000818001 I
scaffold395-EXSNAP2012.4 Pristionchus exspectatus scaffold395-EXSNAP2012.4 I
nOo.2.0.1.g01159 Onchocerca ochengi nOo.2.0.1.g01159 I
nLs.2.1.2.g06827 Litomosoides sigmodontis nLs.2.1.2.g06827 I
NECAME_08408 Necator americanus NECAME_08408 I
nDi.2.2.2.g05871 Dirofilaria immitis nDi.2.2.2.g05871 I
NBR_0000990501 Nippostrongylus brasiliensis NBR_0000990501 I
LOAG_00579 Loa loa LOAG_00579 I
HPLM_0001493201 Haemonchus placei HPLM_0001493201 I
HCOI00889400 Haemonchus contortus HCOI00889400 I
GPUH_0001513701 Gongylonema pulchrum GPUH_0001513701 I
EVEC_0001078501 Enterobius vermicularis EVEC_0001078501 I
EEL_0000443001 Elaeophora elaphi EEL_0000443001 I
DME_0000745901 Dracunculus medinensis DME_0000745901 I
DICVIV_08037 Dictyocaulus viviparus DICVIV_08037 I
ENSBTAG00000013213 Bos taurus ENSBTAG00000013213 I
ENSLAFG00000009420 Loxodonta africana ENSLAFG00000009420 I
ENSGMOG00000016368 Gadus morhua ENSGMOG00000016368 I
osr2 Gasterosteus aculeatus ENSGACG00000003524 I
ENSFCAG00000014220 Felis catus ENSFCAG00000014220 I
osr2 Danio rerio ENSDARG00000038006 I
ENSCSAG00000012312 Chlorocebus sabaeus ENSCSAG00000012312 I
ENSCPOG00000020572 Cavia porcellus ENSCPOG00000020572 I
ENSCING00000006616 Ciona intestinalis ENSCING00000006616 I
ENSLOCG00000009790 Lepisosteus oculatus ENSLOCG00000009790 I
ENSAMXG00000014504 Astyanax mexicanus ENSAMXG00000014504 I
ENSACAG00000016280 Anolis carolinensis ENSACAG00000016280 I
CRE25083 Caenorhabditis remanei CRE25083 I
CRE00192 Caenorhabditis remanei CRE00192 I
CJA04579 Caenorhabditis japonica CJA04579 I
CGI_10012022 Crassostrea gigas CGI_10012022 I
CBG14844 Caenorhabditis briggsae CBG14844 I
LotgiG102775 Lottia gigantea LotgiG102775 I
ENSMLUG00000013412 Myotis lucifugus ENSMLUG00000013412 I
ENSMPUG00000015246 Mustela putorius furo ENSMPUG00000015246 I
ENSOCUG00000022383 Oryctolagus cuniculus ENSOCUG00000022383 I
ENSPANG00000012764 Papio anubis ENSPANG00000012764 I
ENSPFOG00000012273 Poecilia formosa ENSPFOG00000012273 I
ENSPSIG00000011787 Pelodiscus sinensis ENSPSIG00000011787 I
Osr2 Rattus norvegicus ENSRNOG00000011136 I
ENSSHAG00000007793 Sarcophilus harrisii ENSSHAG00000007793 I
OSR2 Sus scrofa ENSSSCG00000006073 I
ENSSTOG00000021263 Ictidomys tridecemlineatus ENSSTOG00000021263 I
ENSTGUG00000012027 Taeniopygia guttata ENSTGUG00000012027 I
osr2 Tetraodon nigroviridis ENSTNIG00000013301 I
osr2 Takifugu rubripes ENSTRUG00000011070 I
ENSXMAG00000002498 Xiphophorus maculatus ENSXMAG00000002498 I
Bm9236 Brugia malayi Bm9236 I