ENSSSCG00000006960 (Sus scrofa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSSCG00000006960 T110278_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GLI4
M08394_2.00 		Homo sapiens
TKRNCNTGGCATTCAAGGCYY
RRGCCTTGAATGCCANGNYMA		 ChIP-seq
Schmitges et al.(2016)
P10075.MEME 		0.800 0.944
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000007422 C2H2 ZF 194 216
ENSSSCP00000007422 C2H2 ZF 222 244
ENSSSCP00000007422 C2H2 ZF 250 272
ENSSSCP00000007422 C2H2 ZF 278 300
ENSSSCP00000007422 C2H2 ZF 306 328
ENSSSCP00000007422 C2H2 ZF 334 356
ENSSSCP00000007422 C2H2 ZF 362 384
ENSSSCP00000025296 C2H2 ZF 186 208
ENSSSCP00000025296 C2H2 ZF 214 236
ENSSSCP00000025296 C2H2 ZF 242 264
ENSSSCP00000025296 C2H2 ZF 270 292
ENSSSCP00000025296 C2H2 ZF 298 320
ENSSSCP00000025296 C2H2 ZF 326 348
ENSSSCP00000025296 C2H2 ZF 354 376
ENSSSCP00000028165 C2H2 ZF 193 215
ENSSSCP00000028165 C2H2 ZF 221 243
ENSSSCP00000028165 C2H2 ZF 249 271
ENSSSCP00000028165 C2H2 ZF 277 299
ENSSSCP00000028165 C2H2 ZF 305 327
ENSSSCP00000028165 C2H2 ZF 333 355
ENSSSCP00000028165 C2H2 ZF 361 383

Links

Other C2H2 ZF family TFs
Other Sus scrofa TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRIUR3_19503 Triticum urartu TRIUR3_19503 I 0.000
AMTR_s00057p00091350 Amborella trichopoda AMTR_s00057p00091350 I 0.000
ORGLA06G0077700 Oryza glaberrima ORGLA06G0077700 I 0.000
ORUFI02G34010 Oryza rufipogon ORUFI02G34010 I 0.000
ORUFI06G08510 Oryza rufipogon ORUFI06G08510 I 0.000
OS06G0228950 Oryza sativa OS06G0228950 I 0.000
Sb10g008120 Sorghum bicolor Sb10g008120 I 0.000
Si008273m.g Setaria italica Si008273m.g I 0.000
Si020172m.g Setaria italica Si020172m.g I 0.000
Traes_6BL_301505440 Triticum aestivum Traes_6BL_301505440 I 0.000
Traes_6DL_8ECBBC867 Triticum aestivum Traes_6DL_8ECBBC867 I 0.000
Traes_7DS_405F08A53 Triticum aestivum Traes_7DS_405F08A53 I 0.000
ORGLA02G0278600 Oryza glaberrima ORGLA02G0278600 I 0.000
30138.m004071 Ricinus communis 30138.m004071 I 0.000
mg020279m Mimulus guttatus mg020279m I 0.000
mgf022310m Mimulus guttatus mgf022310m I 0.000
MDP0000266172 Malus domestica MDP0000266172 I 0.000
Pavir.Aa00708 Panicum virgatum Pavir.Aa00708 I 0.000
Pavir.Ab02992 Panicum virgatum Pavir.Ab02992 I 0.000
Pavir.Da01160 Panicum virgatum Pavir.Da01160 I 0.000
Pavir.J13146 Panicum virgatum Pavir.J13146 I 0.000
Thhalv10019554m.g Eutrema salsugineum Thhalv10019554m.g I 0.000
PDK_20s1383532g001 Phoenix dactylifera PDK_20s1383532g001 I 0.000
MLOC_59560 Hordeum vulgare MLOC_59560 I 0.000
BGIOSGA005630 Oryza indica BGIOSGA005630 I 0.000
BGIOSGA022580 Oryza indica BGIOSGA022580 I 0.000
F775_00225 Aegilops tauschii F775_00225 I 0.000
F775_07483 Aegilops tauschii F775_07483 I 0.000
fgenesh1_pg.C_scaffold_2001738 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001738 I 0.000
GRMZM2G392306 Zea mays GRMZM2G392306 I 0.000
LPERR06G07570 Leersia perrieri LPERR06G07570 I 0.000
MLOC_12609 Hordeum vulgare MLOC_12609 I 0.000
OPUNC06G07940 Oryza punctata OPUNC06G07940 I 0.000
OB02G39310 Oryza brachyantha OB02G39310 I 0.000
OB06G17750 Oryza brachyantha OB06G17750 I 0.000
OBART02G32320 Oryza barthii OBART02G32320 I 0.000
OGLUM02G32960 Oryza glumaepatula OGLUM02G32960 I 0.000
OLONG_016325 Oryza longistaminata OLONG_016325 I 0.000
OMERI02G30990 Oryza meridionalis OMERI02G30990 I 0.000
OMERI06G09770 Oryza meridionalis OMERI06G09770 I 0.000
ONIVA06G04700 Oryza nivara ONIVA06G04700 I 0.000
ONIVA06G09450 Oryza nivara ONIVA06G09450 I 0.000
OPUNC02G29870 Oryza punctata OPUNC02G29870 I 0.000
LPERR02G26470 Leersia perrieri LPERR02G26470 N 0.000
Sb04g028040 Sorghum bicolor Sb04g028040 N 0.000
GRMZM2G105641 Zea mays GRMZM2G105641 N 0.000
BRADI3G59410 Brachypodium distachyon BRADI3G59410 N 0.000
Pavir.J17077 Panicum virgatum Pavir.J17077 N 0.000