zbtb42 (Tetraodon nigroviridis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTNIG00000000917 T111895_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB42
M08351_2.00 		Homo sapiens
MRCAKCTGS
SCAGMTGYK		 ChIP-seq
Schmitges et al.(2016)
B2RXF5_2-4.RCADE 		0.770 0.857
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000003209 C2H2 ZF 369 391
ENSTNIP00000003209 C2H2 ZF 410 431
ENSTNIP00000003209 C2H2 ZF 437 459
ENSTNIP00000003209 C2H2 ZF 465 488

Links

Other C2H2 ZF family TFs
Other Tetraodon nigroviridis TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZBTB42 Homo sapiens ENSG00000179627 D 0.770
ENSONIG00000012149 Oreochromis niloticus ENSONIG00000012149 I 0.815
znf238.2 Xenopus tropicalis XB-GENE-1219066 I 0.810
Pvit_02527 Pogona vitticeps Pvit_02527 I 0.795
Ogr11588 Ophisaurus gracilis Ogr11588 I 0.797
ENSP00000409107 Macaca fascicularis ENSP00000409107 I 0.770
Alligator_sinensis_CCG020881.1 Alligator sinensis Alligator_sinensis_CCG020881.1 I 0.798
ENSXMAG00000006703 Xiphophorus maculatus ENSXMAG00000006703 I 0.827
zbtb42 Takifugu rubripes ENSTRUG00000013592 I 0.827
ENSSHAG00000008534 Sarcophilus harrisii ENSSHAG00000008534 I 0.806
ZBTB42 Pan troglodytes ENSPTRG00000040287 I 0.770
ENSPFOG00000010298 Poecilia formosa ENSPFOG00000010298 I 0.827
zbtb42 Oryzias latipes ENSORLG00000017008 I 0.825
ZBTB42 Anolis carolinensis ENSACAG00000011451 I 0.809
ZBTB42 Monodelphis domestica ENSMODG00000013701 I 0.806
ZBTB42 Meleagris gallopavo ENSMGAG00000015389 I 0.798
ENSLOCG00000012759 Lepisosteus oculatus ENSLOCG00000012759 I 0.822
ZBTB42 Gallus gallus ENSGALG00000023025 I 0.798
zbtb42 Gasterosteus aculeatus ENSGACG00000006297 I 0.822
zbtb42 Danio rerio ENSDARG00000102761 I 0.821
ENSCSAG00000019588 Chlorocebus sabaeus ENSCSAG00000019588 I 0.770
ENSAMEG00000007755 Ailuropoda melanoleuca ENSAMEG00000007755 I 0.781
ENSAMXG00000025635 Astyanax mexicanus ENSAMXG00000025635 N 0.770