CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GF18915
(
Drosophila ananassae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0095929
T114916_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
opa
M03668_2.00
Drosophila melanogaster
BVCCCCCCRYNGHB
VDCNRYGGGGGGBV
SELEX
Nitta et al.(2015)
opa_1
0.827
1.000
opa
M05861_2.00
Drosophila melanogaster
VCCCCCCRYNGNK
MNCNRYGGGGGGB
SMiLE-seq
Isakova et al.(2017)
Opa
0.827
1.000
opa
M06468_2.00
Drosophila melanogaster
GMCCCCCCGCDG
CHGCGGGGGGKC
B1H
Mathelier et al.(2014)
MA0456.1
0.827
1.000
opa
M06062_2.00
Drosophila melanogaster
GMCCCCCCRCDG
CHGYGGGGGGKC
B1H
Zhu et al.(2011)
opa_NAR_FBgn0003002
0.827
1.000
opa
M06063_2.00
Drosophila melanogaster
MKVMMCCCCMCYR
YRGKGGGGKKBMK
B1H
Zhu et al.(2011)
Opa_SANGER_5_FBgn0003002
0.827
1.000
ref-2
M00621_2.00
Caenorhabditis elegans
CMYRSNGNBH
DVNCNSYRKG
PBM
Narasimhan et al.(2015)
pTH9089
0.757
0.739
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0122107
C2H2 ZF
274
301
HACFWIGCSRNGRPFKAKYKLVNHIRVH
FBpp0122107
C2H2 ZF
307
331
FACPHPGCGKVFARSENLKIHKRTH
FBpp0122107
C2H2 ZF
337
361
FKCEHEGCDRRFANSSDRKKHSHVH
FBpp0122107
C2H2 ZF
367
391
YNCRINGCDKSYTHPSSLRKHMKVH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila ananassae
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_033870
Theobroma cacao
TCM_033870
N
PK09561.1
Cannabis sativa
PK09561.1
N
SapurV1A.0361s0280
Salix purpurea
SapurV1A.0361s0280
N
Lus10014044.g
Linum usitatissimum
Lus10014044.g
N
Lus10009764.g
Linum usitatissimum
Lus10009764.g
N
Lus10006483.g
Linum usitatissimum
Lus10006483.g
N
Gorai.002G131600
Gossypium raimondii
Gorai.002G131600
N
Ciclev10002314m.g
Citrus clementina
Ciclev10002314m.g
N
Aquca_016_00429
Aquilegia coerulea
Aquca_016_00429
N
Cucsa.232760
Cucumis sativus
Cucsa.232760
N
Bo6g124000
Brassica oleracea
Bo6g124000
N
Sb07g006170
Sorghum bicolor
Sb07g006170
N
PRUPE_ppb024440mg
Prunus persica
PRUPE_ppb024440mg
N
POPTR_0014s03120
Populus trichocarpa
POPTR_0014s03120
N
MTR_3g101520
Medicago truncatula
MTR_3g101520
N
LPERR06G05590
Leersia perrieri
LPERR06G05590
N
GRMZM2G106673
Zea mays
GRMZM2G106673
N
GLYMA04G04030
Glycine max
GLYMA04G04030
N
Bra035129
Brassica rapa
Bra035129
N