CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr8G25650_001
(
Musa acuminata
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
GSMUA_Achr8G25650_001
T118742_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr8P25650_001
C2H2 ZF
220
241
FVCRKCGKALAVRGDWRTHEKN
GSMUA_Achr8P25650_001
C2H2 ZF
240
266
KNCGKLWYCICGSDFKHKRSLKDHIKS
Links
Other
C2H2 ZF
family TFs
Other
Musa acuminata
TFs
174 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava31335.valid.m1
Manihot esculenta
cassava31335.valid.m1
N
0.000
SapurV1A.0451s0060
Salix purpurea
SapurV1A.0451s0060
N
0.000
orange1.1g004488m.g
Citrus sinensis
orange1.1g004488m.g
N
0.000
Lus10040284.g
Linum usitatissimum
Lus10040284.g
N
0.000
Lus10023404.g
Linum usitatissimum
Lus10023404.g
N
0.000
Gorai.011G266200
Gossypium raimondii
Gorai.011G266200
N
0.000
Gorai.010G201000
Gossypium raimondii
Gorai.010G201000
N
0.000
evm.TU.supercontig_1.422
Carica papaya
evm.TU.supercontig_1.422
N
0.000
Ciclev10030787m.g
Citrus clementina
Ciclev10030787m.g
N
0.000
POPTR_0008s05750
Populus trichocarpa
POPTR_0008s05750
N
0.000
cassava15723.m1
Manihot esculenta
cassava15723.m1
N
0.000
27568.m000253
Ricinus communis
27568.m000253
N
0.000
VIT_13s0019g01810
Vitis vinifera
VIT_13s0019g01810
N
0.000
VIT_13s0019g01790
Vitis vinifera
VIT_13s0019g01790
N
0.000
VIT_13s0019g01700
Vitis vinifera
VIT_13s0019g01700
N
0.000
TCM_042705
Theobroma cacao
TCM_042705
N
0.000
XM_002316242.1
Populus trichocarpa
POPTR_0010s20980
N
0.000