HelroG145685 (Helobdella robusta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 HelroG145685 T119196_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sens
M03666_2.00 		Drosophila melanogaster
TGCWSTGATTTATY
RATAAATCASWGCA		 SELEX
Nitta et al.(2015)
sens_1 		0.778 0.804
sens
M06056_2.00 		Drosophila melanogaster
AAATCACDGC
GCHGTGATTT		 B1H
Zhu et al.(2011)
sens_SANGER_10_FBgn0002573 		0.778 0.804
sens
M06057_2.00 		Drosophila melanogaster
NNNNAAATCACRGCH
DGCYGTGATTTNNNN		 B1H
Zhu et al.(2011)
sens_SOLEXA_5_FBgn0002573 		0.778 0.804
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HelroP145685 C2H2 ZF 4 26
HelroP145685 C2H2 ZF 32 54
HelroP145685 C2H2 ZF 60 82
HelroP145685 C2H2 ZF 88 111

Links

Other C2H2 ZF family TFs
Other Helobdella robusta TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.358990 Cucumis sativus Cucsa.358990 N
PK03816.1 Cannabis sativa PK03816.1 N
SapurV1A.1168s0060 Salix purpurea SapurV1A.1168s0060 N
SapurV1A.0002s0250 Salix purpurea SapurV1A.0002s0250 N
orange1.1g048259m.g Citrus sinensis orange1.1g048259m.g N
MDP0000500940 Malus domestica MDP0000500940 N
MDP0000276691 Malus domestica MDP0000276691 N
Gorai.010G228000 Gossypium raimondii Gorai.010G228000 N
Gorai.006G098600 Gossypium raimondii Gorai.006G098600 N
gene05956-v1.0-hybrid Fragaria vesca gene05956-v1.0-hybrid N
evm.TU.supercontig_181.13 Carica papaya evm.TU.supercontig_181.13 N
Eucgr.J02994 Eucalyptus grandis Eucgr.J02994 N
Ciclev10025757m.g Citrus clementina Ciclev10025757m.g N
mgf024433m Mimulus guttatus mgf024433m N
GLYMA15G01730 Glycine max GLYMA15G01730 N
cassava1476.valid.m1 Manihot esculenta cassava1476.valid.m1 N
29872.m000548 Ricinus communis 29872.m000548 N
Pm027397 Prunus mume Pm027397 N
Pm013502 Prunus mume Pm013502 N
Cla015679 Citrullus lanatus Cla015679 N
VIT_11s0016g04130 Vitis vinifera VIT_11s0016g04130 N
VIT_09s0002g04700 Vitis vinifera VIT_09s0002g04700 N
Solyc12g043090.1 Solanum lycopersicum Solyc12g043090.1 N
PRUPE_ppa009556mg Prunus persica PRUPE_ppa009556mg N
POPTR_0003s05470 Populus trichocarpa POPTR_0003s05470 N
POPTR_0001s18000 Populus trichocarpa POPTR_0001s18000 N
PGSC0003DMG400031382 Solanum tuberosum PGSC0003DMG400031382 N
MTR_2g102227 Medicago truncatula MTR_2g102227 N