OMERI03G35870 (Oryza meridionalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 OMERI03G35870 T124892_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.784 0.761
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.784 0.761
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.783 0.696
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.761 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI03G35870.1 C2H2 ZF 55 77
OMERI03G35870.1 C2H2 ZF 109 131

Links

Other C2H2 ZF family TFs
Other Oryza meridionalis TFs

364 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
bs Drosophila melanogaster FBgn0004101 D
AALB009947 Anopheles albimanus AALB009947 I
AMEC009624 Anopheles melas AMEC009624 I
AMAM005702 Anopheles maculatus AMAM005702 I
AFUN006149 Anopheles funestus AFUN006149 I
AFAF006302 Anopheles farauti AFAF006302 I
AEPI007009 Anopheles epiroticus AEPI007009 I
ACUA001543 Anopheles culicifacies ACUA001543 I
ACOM041695 Anopheles coluzzii ACOM041695 I
ACHR006794 Anopheles christyi ACHR006794 I
AARA006326 Anopheles arabiensis AARA006326 I
AQUA001309 Anopheles quadriannulatus AQUA001309 I
LDEC007646 Leptinotarsa decemlineata LDEC007646 I
LCUP011662 Lucilia cuprina LCUP011662 I
HHAL001484-PA Halyomorpha halys HHAL001484-PA I
CLEC013393 Cimex lectularius CLEC013393 I
Sakowv30019106m.g Saccoglossus kowalevskii Sakowv30019106m.g I
fgenesh2_pg.scaffold_8000100 Branchiostoma floridae fgenesh2_pg.scaffold_8000100 I
fgenesh2_pg.scaffold_196000035 Branchiostoma floridae fgenesh2_pg.scaffold_196000035 I
Hsal_11632--XP_001120126.1_APIME Harpegnathos saltator Hsal_11632--XP_001120126.1_APIME I
Cflo_11261--XP_001120126.1_APIME Camponotus floridanus Cflo_11261--XP_001120126.1_APIME I
L596_g5274 Steinernema carpocapsae L596_g5274 I
TTRE_0000468501 Trichuris trichiura TTRE_0000468501 I
TMUE_s0092001100 Trichuris muris TMUE_s0092001100 I
SBAD_0000850501 Soboliphyme baturini SBAD_0000850501 I
RSKR_0001102000 Rhabditophanes kr3021 RSKR_0001102000 I
OFLC_0001346401 Onchocerca flexuosa OFLC_0001346401 I
L898_g9834 Steinernema monticolum L898_g9834 I
L893_g14743 Steinernema glaseri L893_g14743 I
L892_g14520 Steinernema scapterisci L892_g14520 I
L889_g24087 Steinernema feltiae L889_g24087 I
AMIN001256 Anopheles minimus AMIN001256 I
D918_07967 Trichuris suis D918_07967 I
D917_02561 Trichinella nativa D917_02561 I
ANCDUO_18278 Ancylostoma duodenale ANCDUO_18278 I
ANCDUO_13359 Ancylostoma duodenale ANCDUO_13359 I
ALUE_0001693901 Ascaris lumbricoides ALUE_0001693901 I
PPAI006358 Phlebotomus papatasi PPAI006358 I
MDOA002443 Musca domestica MDOA002443 I
ASTEI07121 Anopheles stephensi ASTEI07121 I
SMAR003014 Strigamia maritima SMAR003014 I
CPIJ016459 Culex quinquefasciatus CPIJ016459 I
GG22961 Drosophila erecta FBgn0115118 I
GF11392 Drosophila ananassae FBgn0088432 I
GA17433 Drosophila pseudoobscura FBgn0077446 I
ENSXMAG00000018559 Xiphophorus maculatus ENSXMAG00000018559 I
SRF Oryzias latipes ENSORLG00000013036 I
ENSCSAVG00000008682 Ciona savignyi ENSCSAVG00000008682 I
SRF Choloepus hoffmanni ENSCHOG00000008671 I
EFV60876 Trichinella spiralis EFV60876 I
DAPPUDRAFT_8703 Daphnia pulex DAPPUDRAFT_8703 I
GH20989 Drosophila grimshawi FBgn0128451 I
CPIJ008336 Culex quinquefasciatus CPIJ008336 I
CJA08385 Caenorhabditis japonica CJA08385 I
BGIBMGA001382 Bombyx mori BGIBMGA001382 I
AGAP010511 Anopheles gambiae AGAP010511 I
ACEP12187 Atta cephalotes ACEP12187 I
AAEL010925 Aedes aegypti AAEL010925 I
SPPG_06208 Spizellomyces punctatus SPPG_06208 I
RO3G_00948 Rhizopus oryzae RO3G_00948 I
CpipJ_CPIJ016459 Culex pipiens CpipJ_CPIJ016459 I
HelroG137972 Helobdella robusta HelroG137972 I
CpipJ_CPIJ008336 Culex pipiens CpipJ_CPIJ008336 I
SINV23963 Solenopsis invicta SINV23963 I
RPRC001752 Rhodnius prolixus RPRC001752 I
NV18787 Nasonia vitripennis NV18787 I
MESCA004860 Megaselia scalaris MESCA004860 I
L798_08800 Zootermopsis nevadensis L798_08800 I
KGM_22252 Danaus plexippus KGM_22252 I
ISCW019966 Ixodes scapularis ISCW019966 I
HMEL017831 Heliconius melpomene HMEL017831 I
YQE_03076 Dendroctonus ponderosae YQE_03076 I
GLOINDRAFT_82941 Rhizophagus irregularis GLOINDRAFT_82941 I
GB47234 Apis mellifera GB47234 I
GE14398 Drosophila yakuba FBgn0232006 I
GK22205 Drosophila willistoni FBgn0224190 I
GJ21595 Drosophila virilis FBgn0208714 I
GD11852 Drosophila simulans FBgn0183591 I
GM11854 Drosophila sechellia FBgn0166795 I
GL20046 Drosophila persimilis FBgn0157643 I
GI21322 Drosophila mojavensis FBgn0144052 I