OMERI08G14120 (Oryza meridionalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 OMERI08G14120 T124913_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SGR5
M06805_2.00 		Arabidopsis thaliana
WTTTTGTCTTWTHYD
HRDAWAAGACAAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_col_a 		0.759 0.905
SGR5
M06806_2.00 		Arabidopsis thaliana
WTTTGTCTYWWHBNN
NNVDWWRAGACAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_colamp_a 		0.759 0.905
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI08G14120.1 C2H2 ZF 143 164
OMERI08G14120.1 C2H2 ZF 164 189

Links

Other C2H2 ZF family TFs
Other Oryza meridionalis TFs

119 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT3G05860 Arabidopsis thaliana AT3G05860 I
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I
Bostr.2570s0083 Boechera stricta Bostr.2570s0083 I
Thhalv10021183m.g Eutrema salsugineum Thhalv10021183m.g I
Bo5g145010 Brassica oleracea Bo5g145010 N
Bra039404 Brassica rapa Bra039404 N
Carubv10015167m.g Capsella rubella Carubv10015167m.g N