SPU_027491 (Strongylocentrotus purpuratus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SPU_027491 T129783_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FEZF1
M08307_2.00 		Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN		 ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE 		0.790 0.891
FEZF1
M08889_2.00 		Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH		 Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C 		0.790 0.891
erm
M03686_2.00 		Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA		 SELEX
Nitta et al.(2015)
CG31670_1 		0.790 0.870
erm
M06128_2.00 		Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM		 B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375 		0.790 0.870
erm
M06129_2.00 		Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV		 B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375 		0.790 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SPU_027491-tr C2H2 ZF 313 335
SPU_027491-tr C2H2 ZF 341 363
SPU_027491-tr C2H2 ZF 369 391
SPU_027491-tr C2H2 ZF 397 419
SPU_027491-tr C2H2 ZF 425 447
SPU_027491-tr C2H2 ZF 453 476

Links

Other C2H2 ZF family TFs
Other Strongylocentrotus purpuratus TFs

168 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATBZIP42 Arabidopsis thaliana AT3G30530 D 0.000
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I 0.000
30138.m003866 Ricinus communis 30138.m003866 I 0.000
Ciclev10032777m.g Citrus clementina Ciclev10032777m.g I 0.000
Ciclev10027584m.g Citrus clementina Ciclev10027584m.g I 0.000
Ciclev10013334m.g Citrus clementina Ciclev10013334m.g I 0.000
Carubv10002068m.g Capsella rubella Carubv10002068m.g I 0.000
Cagra.6845s0027 Capsella grandiflora Cagra.6845s0027 I 0.000
Bostr.2902s0318 Boechera stricta Bostr.2902s0318 I 0.000
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I 0.000
Aquca_006_00040 Aquilegia coerulea Aquca_006_00040 I 0.000
mgf017392m Mimulus guttatus mgf017392m I 0.000
mgf003466m Mimulus guttatus mgf003466m I 0.000
Cucsa.284240 Cucumis sativus Cucsa.284240 I 0.000
Cucsa.238410 Cucumis sativus Cucsa.238410 I 0.000
Cucsa.174700 Cucumis sativus Cucsa.174700 I 0.000
cassava9577.m1 Manihot esculenta cassava9577.m1 I 0.000
cassava46237.m1 Manihot esculenta cassava46237.m1 I 0.000
cassava41140.m1 Manihot esculenta cassava41140.m1 I 0.000
cassava35454.valid.m1 Manihot esculenta cassava35454.valid.m1 I 0.000
cassava32522.m1 Manihot esculenta cassava32522.m1 I 0.000
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.000
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I 0.000
MDP0000891108 Malus domestica MDP0000891108 I 0.000
AMTR_s00006p00259200 Amborella trichopoda AMTR_s00006p00259200 I 0.000
chr2.CM0021.50.nd Lotus japonicus chr2.CM0021.50.nd I 0.000
Thhalv10015835m.g Eutrema salsugineum Thhalv10015835m.g I 0.000
SapurV1A.0432s0050 Salix purpurea SapurV1A.0432s0050 I 0.000
SapurV1A.0084s0340 Salix purpurea SapurV1A.0084s0340 I 0.000
SapurV1A.0060s0610 Salix purpurea SapurV1A.0060s0610 I 0.000
orange1.1g043159m.g Citrus sinensis orange1.1g043159m.g I 0.000
orange1.1g042014m.g Citrus sinensis orange1.1g042014m.g I 0.000
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I 0.000
MDP0000891899 Malus domestica MDP0000891899 I 0.000
Eucgr.I02090 Eucalyptus grandis Eucgr.I02090 I 0.000
MDP0000183562 Malus domestica MDP0000183562 I 0.000
Lus10029101.g Linum usitatissimum Lus10029101.g I 0.000
Lus10013059.g Linum usitatissimum Lus10013059.g I 0.000
Lus10011722.g Linum usitatissimum Lus10011722.g I 0.000
Gorai.007G056900 Gossypium raimondii Gorai.007G056900 I 0.000
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I 0.000
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I 0.000
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I 0.000
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.000
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.000
PGSC0003DMG400007523 Solanum tuberosum PGSC0003DMG400007523 I 0.000
30131.m007078 Ricinus communis 30131.m007078 I 0.000
PGSC0003DMG400001916 Solanum tuberosum PGSC0003DMG400001916 I 0.000
MTR_8g015250 Medicago truncatula MTR_8g015250 I 0.000
MTR_7g029400 Medicago truncatula MTR_7g029400 I 0.000
MTR_5g015090 Medicago truncatula MTR_5g015090 I 0.000
MTR_4g097440 Medicago truncatula MTR_4g097440 I 0.000
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.000
GLYMA19G05050 Glycine max GLYMA19G05050 I 0.000
GLYMA17G17100 Glycine max GLYMA17G17100 I 0.000
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.000
Bra008670 Brassica rapa Bra008670 I 0.000
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.000
GLYMA11G04920 Glycine max GLYMA11G04920 I 0.000
GLYMA06G01240 Glycine max GLYMA06G01240 I 0.000
GLYMA02G13960 Glycine max GLYMA02G13960 I 0.000
GLYMA01G40370 Glycine max GLYMA01G40370 I 0.000
GLYMA01G09510 Glycine max GLYMA01G09510 I 0.000
AtbZIP3 Arabidopsis lyrata fgenesh2_kg.6__1562__AT5G15830.1 I 0.000
Bra023540 Brassica rapa Bra023540 I 0.000
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I 0.000
Bo2g012800 Brassica oleracea Bo2g012800 I 0.000
Pm015434 Prunus mume Pm015434 I 0.000
Pm002353 Prunus mume Pm002353 I 0.000
Cla020641 Citrullus lanatus Cla020641 I 0.000
Cla016748 Citrullus lanatus Cla016748 I 0.000
Cla005975 Citrullus lanatus Cla005975 I 0.000
Bo9g163740 Brassica oleracea Bo9g163740 I 0.000
Ca_09362 Cicer arietinum Ca_09362 I 0.000
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.000
TCM_000835 Theobroma cacao TCM_000835 I 0.000
Solyc04g005170.1 Solanum lycopersicum Solyc04g005170.1 I 0.000
Solyc01g109880.2 Solanum lycopersicum Solyc01g109880.2 I 0.000
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I 0.000
PRUPE_ppa011589mg Prunus persica PRUPE_ppa011589mg I 0.000
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I 0.000
POPTR_0010s14530 Populus trichocarpa POPTR_0010s14530 I 0.000
POPTR_0008s11260 Populus trichocarpa POPTR_0008s11260 I 0.000
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I 0.000
evm.TU.supercontig_53.3 Carica papaya evm.TU.supercontig_53.3 N 0.000
MDP0000261154 Malus domestica MDP0000261154 N 0.000
Ca_15971 Cicer arietinum Ca_15971 N 0.000
28976.m000155 Ricinus communis 28976.m000155 N 0.000