Cla001400 (Citrullus lanatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cla001400 T133922_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.764 0.652
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.764 0.652
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.761 0.696
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.761 0.674
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.760 0.674
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.760 0.674
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.760 0.674
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.756 0.652
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.756 0.652
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla001400 C2H2 ZF 178 200
Cla001400 C2H2 ZF 215 237

Links

Other C2H2 ZF family TFs
Other Citrullus lanatus TFs

148 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BCL11A Homo sapiens ENSG00000119866 D 0.000
BCL11B Homo sapiens ENSG00000127152 D 0.000
ENSACAG00000013085 Anolis carolinensis ENSACAG00000013085 I 0.000
BCL11A Anolis carolinensis ENSACAG00000015159 I 0.000
ENSAMXG00000004597 Astyanax mexicanus ENSAMXG00000004597 I 0.000
ENSAMXG00000015839 Astyanax mexicanus ENSAMXG00000015839 I 0.000
ENSAMXG00000018130 Astyanax mexicanus ENSAMXG00000018130 I 0.000
ENSAPLG00000006283 Anas platyrhynchos ENSAPLG00000006283 I 0.000
ENSAPLG00000007735 Anas platyrhynchos ENSAPLG00000007735 I 0.000
BCL11B Bos taurus ENSBTAG00000018019 I 0.000
BCL11B Canis familiaris ENSCAFG00000017809 I 0.000
BCL11B Callithrix jacchus ENSCJAG00000006713 I 0.000
BCL11A Callithrix jacchus ENSCJAG00000009226 I 0.000
BCL11A Cavia porcellus ENSCPOG00000007587 I 0.000
ENSCPOG00000009946 Cavia porcellus ENSCPOG00000009946 I 0.000
ENSCSAG00000010477 Chlorocebus sabaeus ENSCSAG00000010477 I 0.000
bcl11aa Danio rerio ENSDARG00000061352 I 0.000
bcl11ab Danio rerio ENSDARG00000063153 I 0.000
im:7142702 Danio rerio ENSDARG00000067727 I 0.000
BCL11B Dasypus novemcinctus ENSDNOG00000012677 I 0.000
BCL11A Dasypus novemcinctus ENSDNOG00000019842 I 0.000
Bcl11a Dipodomys ordii ENSDORG00000010064 I 0.000
BCL11A Erinaceus europaeus ENSEEUG00000010958 I 0.000
ENSFALG00000011123 Ficedula albicollis ENSFALG00000011123 I 0.000
BCL11A Felis catus ENSFCAG00000027154 I 0.000
im:7142702 Gasterosteus aculeatus ENSGACG00000005537 I 0.000
bcl11ba Gasterosteus aculeatus ENSGACG00000013118 I 0.000
bcl11aa Gasterosteus aculeatus ENSGACG00000013419 I 0.000
bcl11ab Gasterosteus aculeatus ENSGACG00000019222 I 0.000
ENSGALG00000007866 Gallus gallus ENSGALG00000007866 I 0.000
ENSGALG00000011127 Gallus gallus ENSGALG00000011127 I 0.000
ENSGALG00000028278 Gallus gallus ENSGALG00000028278 I 0.000
BCL11B Gorilla gorilla ENSGGOG00000001232 I 0.000
BCL11A Gorilla gorilla ENSGGOG00000007337 I 0.000
ENSGMOG00000012414 Gadus morhua ENSGMOG00000012414 I 0.000
ENSGMOG00000015842 Gadus morhua ENSGMOG00000015842 I 0.000
ENSLACG00000003560 Latimeria chalumnae ENSLACG00000003560 I 0.000
BCL11A Loxodonta africana ENSLAFG00000003101 I 0.000
BCL11B Loxodonta africana ENSLAFG00000009254 I 0.000
ENSLOCG00000008679 Lepisosteus oculatus ENSLOCG00000008679 I 0.000
ENSLOCG00000016135 Lepisosteus oculatus ENSLOCG00000016135 I 0.000
ENSMEUG00000001829 Macropus eugenii ENSMEUG00000001829 I 0.000
BCL11A Meleagris gallopavo ENSMGAG00000013042 I 0.000
BCL11A Microcebus murinus ENSMICG00000015052 I 0.000
BCL11B Macaca mulatta ENSMMUG00000003261 I 0.000
ENSMMUG00000011303 Macaca mulatta ENSMMUG00000011303 I 0.000
BCL11B Monodelphis domestica ENSMODG00000012964 I 0.000
Bcl11a Mus musculus ENSMUSG00000000861 I 0.000
Bcl11b Mus musculus ENSMUSG00000048251 I 0.000
ENSNLEG00000000711 Nomascus leucogenys ENSNLEG00000000711 I 0.000
BCL11A Ornithorhynchus anatinus ENSOANG00000012402 I 0.000
BCL11B Ornithorhynchus anatinus ENSOANG00000014770 I 0.000
BCL11A Oryctolagus cuniculus ENSOCUG00000023948 I 0.000
ENSOCUG00000024296 Oryctolagus cuniculus ENSOCUG00000024296 I 0.000
BCL11B Otolemur garnettii ENSOGAG00000033204 I 0.000
ENSONIG00000001067 Oreochromis niloticus ENSONIG00000001067 I 0.000
ENSONIG00000002906 Oreochromis niloticus ENSONIG00000002906 I 0.000
ENSONIG00000011060 Oreochromis niloticus ENSONIG00000011060 I 0.000
ENSONIG00000018855 Oreochromis niloticus ENSONIG00000018855 I 0.000
bcl11aa Oryzias latipes ENSORLG00000001704 I 0.000
im:7142702 Oryzias latipes ENSORLG00000010488 I 0.000
bcl11ba Oryzias latipes ENSORLG00000010826 I 0.000
bcl11ab Oryzias latipes ENSORLG00000013169 I 0.000
ENSPANG00000004313 Papio anubis ENSPANG00000004313 I 0.000
ENSPFOG00000003609 Poecilia formosa ENSPFOG00000003609 I 0.000
ENSPFOG00000007224 Poecilia formosa ENSPFOG00000007224 I 0.000
ENSPFOG00000007302 Poecilia formosa ENSPFOG00000007302 I 0.000
ENSPFOG00000019062 Poecilia formosa ENSPFOG00000019062 I 0.000
ENSPPYG00000006131 Pongo abelii ENSPPYG00000006131 I 0.000
ENSPSIG00000013079 Pelodiscus sinensis ENSPSIG00000013079 I 0.000
ENSPSIG00000013644 Pelodiscus sinensis ENSPSIG00000013644 I 0.000
BCL11B Pan troglodytes ENSPTRG00000006707 I 0.000
BCL11A Pteropus vampyrus ENSPVAG00000000042 I 0.000
BCL11B Pteropus vampyrus ENSPVAG00000015516 I 0.000
Bcl11b Rattus norvegicus ENSRNOG00000005776 I 0.000
Bcl11a Rattus norvegicus ENSRNOG00000007049 I 0.000
ENSSHAG00000009291 Sarcophilus harrisii ENSSHAG00000009291 I 0.000
ENSSHAG00000015804 Sarcophilus harrisii ENSSHAG00000015804 I 0.000
BCL11B Sus scrofa ENSSSCG00000002507 I 0.000
BCL11A Sus scrofa ENSSSCG00000008392 I 0.000
ENSSTOG00000004523 Ictidomys tridecemlineatus ENSSTOG00000004523 I 0.000
ENSSTOG00000021531 Ictidomys tridecemlineatus ENSSTOG00000021531 I 0.000
BCL11A Taeniopygia guttata ENSTGUG00000006790 I 0.000
BCL11B Taeniopygia guttata ENSTGUG00000012711 I 0.000
bcl11ba Tetraodon nigroviridis ENSTNIG00000008283 I 0.000
im:7142702 Tetraodon nigroviridis ENSTNIG00000009693 I 0.000
bcl11ab Tetraodon nigroviridis ENSTNIG00000012076 I 0.000
bcl11ba Takifugu rubripes ENSTRUG00000003531 I 0.000
bcl11aa Takifugu rubripes ENSTRUG00000003815 I 0.000
bcl11ab Takifugu rubripes ENSTRUG00000013751 I 0.000
im:7142702 Takifugu rubripes ENSTRUG00000018074 I 0.000
ENSTSYG00000009153 Tarsius syrichta ENSTSYG00000009153 I 0.000
BCL11A Tursiops truncatus ENSTTRG00000006191 I 0.000
BCL11B Tursiops truncatus ENSTTRG00000012140 I 0.000
BCL11A Vicugna pacos ENSVPAG00000000491 I 0.000
ENSXMAG00000007242 Xiphophorus maculatus ENSXMAG00000007242 I 0.000
ENSXMAG00000019910 Xiphophorus maculatus ENSXMAG00000019910 I 0.000
ENSXMAG00000020344 Xiphophorus maculatus ENSXMAG00000020344 I 0.000
ISCW016418 Ixodes scapularis ISCW016418 I 0.000
L798_02171 Zootermopsis nevadensis L798_02171 I 0.000
LotgiG139415 Lottia gigantea LotgiG139415 I 0.000
PHUM606430 Pediculus humanus PHUM606430 I 0.000
RPRC001562 Rhodnius prolixus RPRC001562 I 0.000
SMAR003355 Strigamia maritima SMAR003355 I 0.000
SPU_018909 Strongylocentrotus purpuratus SPU_018909 I 0.000
Aan_R000616 Calypte anna Aan_R000616 I 0.000
Aan_R006276 Calypte anna Aan_R006276 I 0.000
Afo_R004626 Aptenodytes forsteri Afo_R004626 I 0.000
Afo_R011357 Aptenodytes forsteri Afo_R011357 I 0.000
Alligator_sinensis_CCG008166.1 Alligator sinensis Alligator_sinensis_CCG008166.1 I 0.000
Cmyd_10008592 Chelonia mydas Cmyd_10008592 I 0.000
Cmyd_10012109 Chelonia mydas Cmyd_10012109 I 0.000
ENSBTAP00000023987-D2 Bos grunniens ENSBTAP00000023987-D2 I 0.000
ENSP00000338774 Macaca fascicularis ENSP00000338774 I 0.000
ENSP00000349723 Macaca fascicularis ENSP00000349723 I 0.000
Gfo_R006733 Geospiza fortis Gfo_R006733 I 0.000
Gfo_R008167 Geospiza fortis Gfo_R008167 I 0.000
Pvit_09536 Pogona vitticeps Pvit_09536 I 0.000
Pvit_18645 Pogona vitticeps Pvit_18645 I 0.000
fgenesh2_pg.scaffold_136000067 Branchiostoma floridae fgenesh2_pg.scaffold_136000067 I 0.000
Ocbimv22018271m.g Octopus bimaculoides Ocbimv22018271m.g I 0.000
Sakowv30026316m.g Saccoglossus kowalevskii Sakowv30026316m.g I 0.000
HHAL008065-PA Halyomorpha halys HHAL008065-PA I 0.000
bcl11a Xenopus tropicalis XB-GENE-486641 I 0.000
BGLB012676 Biomphalaria glabrata BGLB012676 I 0.000
BCL11A Myotis lucifugus ENSMLUG00000010117 N 0.000
Brh_R004093 Buceros rhinoceros Brh_R004093 N 0.000
ENSP00000349723-D1 Bos grunniens ENSP00000349723-D1 N 0.000