Gfo_R012197 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R012197 T135840_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R012197 C2H2 ZF 562 584
Gfo_R012197 C2H2 ZF 590 612
Gfo_R012197 C2H2 ZF 618 635
Gfo_R012197 C2H2 ZF 646 668

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
prdm1a Oryzias latipes ENSORLG00000015684 N 0.805
EEL_0000388201 Elaeophora elaphi EEL_0000388201 N 0.758
XP_002937203 Xenopus tropicalis XP_002937203 N 0.817
prdm1.S Xenopus laevis XB-GENE-853257 N 0.814
estExt_fgenesh2_pg.C_440063 Branchiostoma floridae estExt_fgenesh2_pg.C_440063 N 0.800
estExt_fgenesh2_pg.C_440053 Branchiostoma floridae estExt_fgenesh2_pg.C_440053 N 0.800
Pvit_09291 Pogona vitticeps Pvit_09291 N 0.815
Ogr18550 Ophisaurus gracilis Ogr18550 N 0.815
ENSBTAP00000001081-D1 Bos grunniens ENSBTAP00000001081-D1 N 0.814
Alligator_sinensis_CCG010969.1 Alligator sinensis Alligator_sinensis_CCG010969.1 N 0.767
Afo_R003683 Aptenodytes forsteri Afo_R003683 N 0.817
GL12308 Drosophila persimilis FBgn0149915 N 0.774
ENSTRUG00000007847 Takifugu rubripes ENSTRUG00000007847 N 0.788
prdm1 Takifugu rubripes ENSTRUG00000000404 N 0.805
PRDM1 Taeniopygia guttata ENSTGUG00000012204 N 0.817
PRDM1 Anolis carolinensis ENSACAG00000005496 N 0.815
ENSONIG00000006687 Oreochromis niloticus ENSONIG00000006687 N 0.805
ENSOARG00000011272 Ovis aries ENSOARG00000011272 N 0.814
ENSOARG00000004628 Ovis aries ENSOARG00000004628 N 0.759
PRDM1 Meleagris gallopavo ENSMGAG00000013524 N 0.817
ENSLOCG00000016531 Lepisosteus oculatus ENSLOCG00000016531 N 0.817
ENSGMOG00000010670 Gadus morhua ENSGMOG00000010670 N 0.773
ENSGMOG00000009730 Gadus morhua ENSGMOG00000009730 N 0.817
ENSGALG00000015388 Gallus gallus ENSGALG00000015388 N 0.817
ENSGACG00000009358 Gasterosteus aculeatus ENSGACG00000009358 N 0.815
prdm1a Gasterosteus aculeatus ENSGACG00000001740 N 0.805
ENSFALG00000011624 Ficedula albicollis ENSFALG00000011624 N 0.817
prdm1a Danio rerio ENSDARG00000002445 N 0.814
PRDM1 Bos taurus ENSBTAG00000000816 N 0.814
ENSAPLG00000013593 Anas platyrhynchos ENSAPLG00000013593 N 0.817