Ogr05757 (Ophisaurus gracilis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ogr05757 T136595_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB37
M04603_2.00 		Homo sapiens
DTCGGCYAABDCGGCAN
NTGCCGHVTTRGCCGAH		 SELEX
Yin et al.(2017)
ZBTB37_eDBD_HT-SELEX 		0.827 1.000
ZBTB37
M04604_2.00 		Homo sapiens
NHRCSRNRNHYACCRYV
BRYGGTRDNYNYSGYDN		 SELEX
Yin et al.(2017)
ZBTB37_eDBD_Methyl-HT-SELEX 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr05757 C2H2 ZF 199 221
Ogr05757 C2H2 ZF 227 249
Ogr05757 C2H2 ZF 255 278

Links

Other C2H2 ZF family TFs
Other Ophisaurus gracilis TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_02034 Cicer arietinum Ca_02034 I 0.000
SapurV1A.0185s0100 Salix purpurea SapurV1A.0185s0100 I 0.000
Pavir.Ab02855 Panicum virgatum Pavir.Ab02855 I 0.000
Pavir.Aa00802 Panicum virgatum Pavir.Aa00802 I 0.000
MDP0000804580 Malus domestica MDP0000804580 I 0.000
Lus10015900.g Linum usitatissimum Lus10015900.g I 0.000
Gorai.012G046200 Gossypium raimondii Gorai.012G046200 I 0.000
gene14755-v1.0-hybrid Fragaria vesca gene14755-v1.0-hybrid I 0.000
Eucgr.I00022 Eucalyptus grandis Eucgr.I00022 I 0.000
Ciclev10027184m.g Citrus clementina Ciclev10027184m.g I 0.000
Carubv10028391m.g Capsella rubella Carubv10028391m.g I 0.000
mgf026503m Mimulus guttatus mgf026503m I 0.000
mgf024641m Mimulus guttatus mgf024641m I 0.000
cassava39895.m1 Manihot esculenta cassava39895.m1 I 0.000
29983.m003297 Ricinus communis 29983.m003297 I 0.000
Ca_12172 Cicer arietinum Ca_12172 I 0.000
GLYMA20G35690 Glycine max GLYMA20G35690 I 0.000
TCM_001660 Theobroma cacao TCM_001660 I 0.000
Si020227m.g Setaria italica Si020227m.g I 0.000
SELMODRAFT_59936 Selaginella moellendorffii SELMODRAFT_59936 I 0.000
SELMODRAFT_49899 Selaginella moellendorffii SELMODRAFT_49899 I 0.000
Sb04g030480 Sorghum bicolor Sb04g030480 I 0.000
Q0DYA2_ORYSJ Oryza sativa Q0DYA2_ORYSJ I 0.000
PRUPE_ppa020272mg Prunus persica PRUPE_ppa020272mg I 0.000
POPTR_0004s14270 Populus trichocarpa POPTR_0004s14270 I 0.000
OPUNC02G27120 Oryza punctata OPUNC02G27120 I 0.000
OMERI02G28440 Oryza meridionalis OMERI02G28440 I 0.000
OGLUM02G30190 Oryza glumaepatula OGLUM02G30190 I 0.000
MLOC_18998 Hordeum vulgare MLOC_18998 I 0.000
LPERR02G24020 Leersia perrieri LPERR02G24020 I 0.000
GRMZM2G069365 Zea mays GRMZM2G069365 I 0.000