Ogr17257 (Ophisaurus gracilis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ogr17257 T136755_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
opa
M03668_2.00 		Drosophila melanogaster
BVCCCCCCRYNGHB
VDCNRYGGGGGGBV		 SELEX
Nitta et al.(2015)
opa_1 		0.771 0.891
opa
M05861_2.00 		Drosophila melanogaster
VCCCCCCRYNGNK
MNCNRYGGGGGGB		 SMiLE-seq
Isakova et al.(2017)
Opa 		0.771 0.891
opa
M06468_2.00 		Drosophila melanogaster
GMCCCCCCGCDG
CHGCGGGGGGKC		 B1H
Mathelier et al.(2014)
MA0456.1 		0.771 0.891
opa
M06062_2.00 		Drosophila melanogaster
GMCCCCCCRCDG
CHGYGGGGGGKC		 B1H
Zhu et al.(2011)
opa_NAR_FBgn0003002 		0.771 0.891
opa
M06063_2.00 		Drosophila melanogaster
MKVMMCCCCMCYR
YRGKGGGGKKBMK		 B1H
Zhu et al.(2011)
Opa_SANGER_5_FBgn0003002 		0.771 0.891
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr17257 C2H2 ZF 21 48
Ogr17257 C2H2 ZF 54 78
Ogr17257 C2H2 ZF 84 108
Ogr17257 C2H2 ZF 114 138

Links

Other C2H2 ZF family TFs
Other Ophisaurus gracilis TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
opa Drosophila melanogaster FBgn0003002 D 0.771
tetur11g00650 Tetranychus urticae tetur11g00650 I 0.765
SMU15033928 Schmidtea mediterranea SMU15033928 I 0.777
SMU15031708 Schmidtea mediterranea SMU15031708 I 0.772
Sakowv30026420m.g Saccoglossus kowalevskii Sakowv30026420m.g I 0.783
Pvit_01334 Pogona vitticeps Pvit_01334 I 0.780
ENSMMUP00000019456 Macaca fascicularis ENSMMUP00000019456 I 0.812
Cmyd_10016551 Chelonia mydas Cmyd_10016551 I 0.813
WBGene00239980 Onchocerca volvulus WBGene00239980 I 0.768
SNAPOd2T00002718001 Oikopleura dioica SNAPOd2T00002718001 I 0.763
TC010234 Tribolium castaneum TC010234 I 0.783
NV11451 Nasonia vitripennis NV11451 I 0.777
NEMVEDRAFT_v1g25267 Nematostella vectensis NEMVEDRAFT_v1g25267 I 0.786
NEMVEDRAFT_v1g121215 Nematostella vectensis NEMVEDRAFT_v1g121215 I 0.780
KGM_22387 Danaus plexippus KGM_22387 I 0.783
GB54250 Apis mellifera GB54250 I 0.778
GK13239 Drosophila willistoni FBgn0215248 I 0.771
nRc.2.0.1.g22468 Romanomermis culicivorax nRc.2.0.1.g22468 I 0.778
TMUE_s0101002100 Trichuris muris TMUE_s0101002100 I 0.773
TCLT_0000586501 Thelazia callipaeda TCLT_0000586501 I 0.763
T265_00048 Opisthorchis viverrini T265_00048 I 0.775
SVE_0347600 Strongyloides venezuelensis SVE_0347600 I 0.767
SSTP_0000201100 Strongyloides stercoralis SSTP_0000201100 I 0.767
SPAL_0001746600 Strongyloides papillosus SPAL_0001746600 I 0.767
RSKR_0001155900 Rhabditophanes kr3021 RSKR_0001155900 I 0.767
PTRK_0000799900 Parastrongyloides trichosuri PTRK_0000799900 I 0.767
GJ11051 Drosophila virilis FBgn0198317 I 0.771
nLs.2.1.2.g02824 Litomosoides sigmodontis nLs.2.1.2.g02824 I 0.775
csin109208 Clonorchis sinensis csin109208 I 0.775
BXY_1106000 Bursaphelenchus xylophilus BXY_1106000 I 0.771
ANCCEY_00370 Ancylostoma ceylanicum ANCCEY_00370 I 0.761
MDOA000052 Musca domestica MDOA000052 I 0.768
XP_002159358.1 Hydra magnipapillata XP_002159358.1 I 0.777
XP_002153782.1 Hydra magnipapillata XP_002153782.1 I 0.780
ZIC5 Ochotona princeps ENSOPRG00000007526 I 0.812
CGI_10016115 Crassostrea gigas CGI_10016115 I 0.786
CGI_10016117 Crassostrea gigas CGI_10016117 I 0.771
DAPPUDRAFT_290567 Daphnia pulex DAPPUDRAFT_290567 I 0.780
ENSACAG00000003701 Anolis carolinensis ENSACAG00000003701 I 0.825
ENSAMXG00000000658 Astyanax mexicanus ENSAMXG00000000658 I 0.771
ENSAMXG00000012318 Astyanax mexicanus ENSAMXG00000012318 I 0.795
macho1 Ciona intestinalis ENSCING00000007968 I 0.769
ENSCSAVG00000001907 Ciona savignyi ENSCSAVG00000001907 I 0.769
zic6 Danio rerio ENSDARG00000071496 I 0.795
ENSDORG00000012706 Dipodomys ordii ENSDORG00000012706 I 0.812
ENSGMOG00000004419 Gadus morhua ENSGMOG00000004419 I 0.795
ZIC1 Monodelphis domestica ENSMODG00000021251 I 0.786
ENSOANG00000012152 Ornithorhynchus anatinus ENSOANG00000012152 I 0.815
ZIC5 Oryctolagus cuniculus ENSOCUG00000026498 I 0.812
ENSONIG00000002719 Oreochromis niloticus ENSONIG00000002719 I 0.795
AGAP001291 Anopheles gambiae AGAP001291 I 0.779
ENSPFOG00000012980 Poecilia formosa ENSPFOG00000012980 I 0.783
ENSPFOG00000023954 Poecilia formosa ENSPFOG00000023954 I 0.775
ENSPPYG00000005471 Pongo abelii ENSPPYG00000005471 I 0.812
ENSPSIG00000011885 Pelodiscus sinensis ENSPSIG00000011885 I 0.766
ENSSHAG00000015025 Sarcophilus harrisii ENSSHAG00000015025 I 0.797
ZIC5 Sus scrofa ENSSSCG00000009521 I 0.812
ENSXMAG00000014868 Xiphophorus maculatus ENSXMAG00000014868 I 0.775
GA10924 Drosophila pseudoobscura FBgn0070980 I 0.771
GF18915 Drosophila ananassae FBgn0095929 I 0.771
GG12590 Drosophila erecta FBgn0104878 I 0.771
GH23039 Drosophila grimshawi FBgn0130496 I 0.771
GI10245 Drosophila mojavensis FBgn0133010 I 0.771
GL21621 Drosophila persimilis FBgn0159214 I 0.771
GM10780 Drosophila sechellia FBgn0165726 I 0.771
GD19752 Drosophila simulans FBgn0191241 I 0.771